Effector profile
| PlantPEAD ID: PlantPEAD30226 | Uniprot ID: A0A3M4E422 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 29438 | Pathogen type: Bacteria |
| Species: Pseudomonas savastanoi | Strain: pv. retacarpa strain ICMP 16946 | Other name: |
| Gene name: | NCBI Gene ID: RBQM01000388 | |
| Entry name: A0A3M4E422_PSESS | Protein name: Type III effector HopW1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTGCTGCAGAATTTGCGTAGCAAAGGTCTCTTGCCCCGATCAGAGGTATCGAGCGAGTCGTACGAAACGTTGGTGCGCAGTTGCGAGGCCGTCGAGCCAAAGTTGACGCTGGGCCAGGTGTTGCTCAAGGCGGGCGGTGATGGGCCGCTCGACGCACGGCGTGTTCATCTTGAAGCTTTGCGCCACGCTCCGACACATGCAGCTTCCGGCGATTCTGGATCACGCGCGCCCGAGCGAGTGGCTGGCGGTTCGCGAAAAGCGGCTGGTCTTTATGCAGAGAAAAAGAGGACAAATTGGACCCAAGCAACCGGGGTCGCCGGGAAAATCGGTCACAAGATTGAATCCCTGTTGGGGATGCGAGATGCGCAGTCTCGTGTCCAGGTGTTCGTCGCATTCATGGCCGATGGGAAGGGGAATACGGACGCAACAACGCTCGATCTAGGTAACGGGTGGACGAGGGTAACGCGTGTCATCAAGGGGAAAACGGCCTTGATCGACTTCCAATGCGAAAGTGATGGGCAGGTTGTAGACGCACGACATCCCGGCAGATTTCCCTTGTTGCCCGAAGGGCATGAGCGGGAAGCCTTCAATACTGTACTTCAAGAACTGAAATTCAGGGGAGCTGAGACGTTGTCCAAAGTCCCTGTATATTACGTCAATAGGAATACGCGGGGTTACGTCATTCCTACCCATGGCTATGTGGTCGCTGGTCACCCCAACCGCGGGCGCAAGAGCGGAGCAGTGTTGTATGGCGTTGGGGGTGAGTCGCCCCGGGTTTTGTAG
Protein sequence:
MLQNLRSKGLLPRSEVSSESYETLVRSCEAVEPKLTLGQVLLKAGGDGPLDARRVHLEALRHAPTHAASGDSGSRAPERVAGGSRKAAGLYAEKKRTNWTQATGVAGKIGHKIESLLGMRDAQSRVQVFVAFMADGKGNTDATTLDLGNGWTRVTRVIKGKTALIDFQCESDGQVVDARHPGRFPLLPEGHEREAFNTVLQELKFRGAETLSKVPVYYVNRNTRGYVIPTHGYVVAGHPNRGRKSGAVLYGVGGESPRVL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 28078.9 | 260 | 9.8 | -0.416 | 34.28 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR029378
Pfam: PF15457
SMART:
KEGG:
PRINTS: