Effector profile
| PlantPEAD ID: PlantPEAD30335 | Uniprot ID: A0A6A3IR24 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 129364 | Pathogen type: Oomycota |
| Species: Phytophthora rubi | Strain: SCRP324 | Other name: |
| Gene name: | NCBI Gene ID: QXFU01002747 | |
| Entry name: A0A6A3IR24_9STRA | Protein name: RxLR effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTATCCTGGAAAATGGTGGGTAGTCCAATACTTCACGTAAGCGCTGTACAGCATCCCCAGCGACTCTTCGTTGAGATTGGCCGCTTTTAACATGGTGTAAAAGTCGTCTAAGTGCATGCCTTCCCTGAATGCCGGGAAAGCGTCTTCTAGGTGGGACTTAGCTTGTGAGAAGAGGGCTCCCAGCAGTTTTGGATCTCTAACCTCAGAGATGATACGAGCTTTGCCATCATTATCTGCCAAAGCAAGCTTCAACAGGATCGCCTTCGCCGCCGCCCAGTCCGACCAGCCTCGCTCTTCTTTGTCTTCGCCGTTGTTAACTTTGTGCACACTCAGGAATCGGCGGTCGTTTCTGGTGTCTTCGTTAGCGCTGGATAGATGCATCTTCGGCTTGGCAATACCGGTAATGGCATCACTAGTTGCCGCAGTAGAGACCGGGGTCAAGACGAGAGCGGTAGCCGCTGCGAGTACAACGTAGCTTAGACGCAT
Protein sequence:
MRLSYVVLAAATALVLTPVSTAATSDAITGIAKPKMHLSSANEDTRNDRRFLSVHKVNNGEDKEERGWSDWAAAKAILLKLALADNDGKARIISEVRDPKLLGALFSQAKSHLEDAFPAFREGMHLDDFYTMLKAANLNEESLGMLYSAYVKYWTTHHFPG
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17809.3 | 161 | 6.59 | -0.226 | 31.67 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: