Effector profile
| PlantPEAD ID: PlantPEAD30713 | Uniprot ID: A0A6A4EZM5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 129364 | Pathogen type: Oomycota |
| Species: Phytophthora rubi | Strain: SCRP333 | Other name: |
| Gene name: | NCBI Gene ID: QXFT01000767 | |
| Entry name: A0A6A4EZM5_9STRA | Protein name: Reverse transcriptase domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTCATGGGTGAGATCACACAGAACGAGGTGATCCAAGCAGTCGCAGCTCTTAACAGGCATAAAGCGGCAGGCCCGGACGGCCTCAACAACGACTTTGTCAAGGACATGCAATCATTATTGGTGCCGGCAATGGTCGCTATTAGCAATGAGCTACTGAAAGGTGGGGACCCACCCCCATCCTTTTTAGAGGCGCTGATAATACCTTTGAAGAAGAAGGGCGACTCCGTTGGCGCGATGAATTTCCGCCCCATTTCGCTTCTTCAGACCGGCTACAAAGTGTTTACCAAAGTGATGGCGACTCGGGCACAGCGAGTAATGGGAACACCTATAGGGGACTCACAGCAAGGGTTCGTGCGCGGGCGGCAGCTCATCAAGACCGTGATGATGATGCTAGCGGTTTTGGCATCAGCGGAATTGCAACCGGAAGTATCGGCGGCCATCAGTCGAGTAATTCTCTTGCTAGATTTCAAGAAAGCCTACGACACGGTGGCTAGGGACTTCCTTTTTATCGCGCTCAGGCGCTTCGGCTTCTCCGAGGAATTTGTGAAGATGATTCAGAAACTGCATAACGGTACAACAGCACGATTCTTGGTTAATGGAGAACTTTCAGAGCCACAAGAAGTCATCTCGGGAATTCGACAAGGTTGTCCTCTGGCGCCGCTGCTATTCCTACTAGCAGCAGAGGTGCTTGCAATAGCGATTAAACAAGACAAGCAGCTAACTGGGGTGCGAGTGCCAGGCGGGGACGGAGCGACGCACAAGTTCTCGGCCTTCGTAGATGATTCAACAGTCTTCCTACAAGAGGCCAACCAACTACCGAGGGCGCTGCAAATTGTGGAGACATTTGGTAAGCTATCGGGCTTACAGAAATTCACGGGATTCCAGTTCTGCAACCCGGAGAAACGGTGCGCTATCTTGGCTATCAAGTAG
Protein sequence:
MLMGEITQNEVIQAVAALNRHKAAGPDGLNNDFVKDMQSLLVPAMVAISNELLKGGDPPPSFLEALIIPLKKKGDSVGAMNFRPISLLQTGYKVFTKVMATRAQRVMGTPIGDSQQGFVRGRQLIKTVMMMLAVLASAELQPEVSAAISRVILLLDFKKAYDTVARDFLFIALRRFGFSEEFVKMIQKLHNGTTARFLVNGELSEPQEVISGIRQGCPLAPLLFLLAAEVLAIAIKQDKQLTGVRVPGGDGATHKFSAFVDDSTVFLQEANQLPRALQIVETFGKLSGLQKFTGFQFCNPEKRCAILAIK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 33833.8 | 310 | 9.34 | 0.176 | 35.21 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR043502,IPR000477
Pfam: PF00078
SMART:
KEGG:
PRINTS: