Effector profile
| PlantPEAD ID: PlantPEAD31480 | Uniprot ID: A0A086GUA5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1930 | Pathogen type: Bacteria |
| Species: Streptomyces scabiei | Strain: NCPPB 4086 | Other name: |
| Gene name: | NCBI Gene ID: JPPX01000139 | |
| Entry name: A0A086GUA5_STRSC | Protein name: Endonuclease | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGCCGTCTTCTCACCTGCCTCGCGGCCGCGGCCCTCACCTGCGGCGGGTTCGTCACGAACGCGTCCCCCGCCGTTGCCGCGGACCCGGCCTCCGGGTCCTTCAGTGCCCTCACCTACAACGTCGCGGGCCTGCCGGAGATCCTCTCGAGCGCGTCCACGCCCCGCGAGTCCAGCACCACGGAGATCGGCCGACGCATCGCGCCGTACGACATCGTGCACGTGGAGGAGGACTTCAACTACCACGCCCACCTCTACGCCGGCGACACCGCGCACGCCTACCGCACCCCCACCAGCGGCGGCGCGGGCATCGGCAGTGGGCTGAACACCCTGTCCACGCTGCCCTACGACATCGACGACTTCGAGCGGGTGCGCTGGAACTCCTGCCAGTTCGACTCCGGCGACTGCCTGACCCCCAAGGGGTTCACCTTCATGCGGGTGCGCCTCACCGAAGGGGTGTACGCCGACTTCTACAACCTGCACACCAACGCCGGCACCAACGCCGGCGACCTGGCCTCGCGCGCCGACAACCTCAGCCAGCTGACGGCCTTCATCAAGACCCACTCGGCCGGCAACGCCGTCGTGGTCATGGGCGACACCAACACCCGCTACACCCGCAGCGGCGACACCATCGCCGAGTTCGCCTCTACCAACGGCCTCACCGACCCGTGGGTGCAGCTGATCCGCGGCGGCACACCGCCGGTCAAGGGCAGCGACGCCCTGGTCTGTGACCAGACCGGCCCCACGGTGCCCAACACCTGCGAGATCGTCGACAAGGTCCTGTACCGCGGCAGCAAACTCGTGTCGCTCGACGCCACGTCCTACAACAACGAGCACGCCAGGTTCCTCACCGACGGCGGGCTCATGCTGTCCGACCACGACCCGGTCGCGGTCGGCTTCTCCTGGTCGCGCGATCCGAACTTCCGGCTCAGCGATCAGTTCGGCGGGCCCCACGGCGACTACTACACCGACATCGACGCCGTACCGGCGGGAGCGCGCCCTGTCACCCTCTCGCTGCGCAGCGGCTCCCGTATCGACGGTGTCGGCCTGACGCTCGGCAACGGCACGGTCCTCACCCACGGCGGCACCGGGGGCACGCTGTCGTCCCTGTCCCTGGGCAGCGGGGAGTACGTCACCTCCGCCCAGCTCTGCCAGGGCCAGAAGAGCGGCCACACCCGGATCTTCTCCGCCAAGTTCACGACCAACCTCGGCAGGAGCCTGTCCGGCGGGACCACCACGTCCGACTGCGTGACGCGCACCGTGCCGTCGGGCTGGCAGATCGCCGGGTTCCACGGGCGCGCCGGTGACGAGATCGACAAGCTCGGCTTCGTCTACACACAGCGCTGA
Protein sequence:
MRRLLTCLAAAALTCGGFVTNASPAVAADPASGSFSALTYNVAGLPEILSSASTPRESSTTEIGRRIAPYDIVHVEEDFNYHAHLYAGDTAHAYRTPTSGGAGIGSGLNTLSTLPYDIDDFERVRWNSCQFDSGDCLTPKGFTFMRVRLTEGVYADFYNLHTNAGTNAGDLASRADNLSQLTAFIKTHSAGNAVVVMGDTNTRYTRSGDTIAEFASTNGLTDPWVQLIRGGTPPVKGSDALVCDQTGPTVPNTCEIVDKVLYRGSKLVSLDATSYNNEHARFLTDGGLMLSDHDPVAVGFSWSRDPNFRLSDQFGGPHGDYYTDIDAVPAGARPVTLSLRSGSRIDGVGLTLGNGTVLTHGGTGGTLSSLSLGSGEYVTSAQLCQGQKSGHTRIFSAKFTTNLGRSLSGGTTTSDCVTRTVPSGWQIAGFHGRAGDEIDKLGFVYTQR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 47344.4 | 448 | 5.72 | -0.211 | 24.47 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036691,IPR001229,IPR036404
Pfam: PF01419
SMART: SM00915
KEGG:
PRINTS: