Effector profile
| PlantPEAD ID: PlantPEAD31774 | Uniprot ID: A0A0P9ZHS6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. ribicola | Other name: |
| Gene name: | NCBI Gene ID: LJRF01000046 | |
| Entry name: A0A0P9ZHS6_PSESI | Protein name: 3-carboxymuconate cye | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CTATTTGTCACTCAAAAAATGCACATAAGAAGGTGCATCTACATCAAGTTTCTGCACCGTTTCGCCGATCATGCCGGTTTGCGGATCACGGCGTACGGTCACGATCTGGTTACTCTTCTGATTGGCAAACAGCATGAACCTGCCGCTGGGGTCGAAGCTGAACTCACGAGGCTCCTTGCCTTCAACAGTGCGACGCTGGATTTCCTCAAGCTTCCCGCTGGCAGGGTCGATGCGGAACACCACGACCTGATTGGCCTCGCCACGGTTGGTCACGTACAGGAACTTGCCGTCGGGTGAGGCGTGCAAGGCGCCGCCGCCGTTCTTCTGGTCAACGCCCTTGTTTTTCATGTCCAGGATCTGGGTTTGCTTGAAGCCGCCGTCCAGGTAGTCGAACACCACCACCTGAGCCGACATTTCCAGTACCAGCCAGGCATGTTTACCATCGCTGCTGAACAGCACATGACGTGGACCACTGCCCGCTGGCAACTGCACGGTCGGCACCTTGGCAGGTTGCAGGGGTTTGGCCTGATCAGCGTTGTAGCGGTAGACGAACAGCTTGTCGGCACCCAGGTCGGCCGTTACCACGTAATTGCCATCCGGCGTTGGCACTGCCAGGTGAACATGGGACGAGGCCTGCCGTTCCGGATTGACCTTGCTGCCAGGGCCCAGAGGCAGGACCTGAACGGCATCACTCAACTGGCCATTCTTGCCGACCGGCATCACAGACAACGCGCCACCCGGATCAGGGTTCACCGCGTAGTTCGCCACGAACAAGTAGCGGCCGTCCTTGCTCAGGCTCGAGTGAGTCGGCTCCTCGCCTTTGGTTTCGACCTGATTGATCGGTGCAACCTTGAAGGTCTTGGGTTCGATGGAGAAACTGCTGACCTTACCCACCGTGTCGGTCTGGCCAGGGCCGTTTTCGTTGACGACGAACAGGTAACGCTGGTCCTTGGAAACCGTCAGCCAGGAGGGGTTCTCGGTCTTGATCACTTGAAGCGGCTTGGGGCTGATCATGCCGGTCTTGCTGTCGAAGCCAAAACGGTAGATCCCCTCGCTCGCGCCCTGGGTGTAGGAACCCAGCAGCAGTTCGGAATCGGTCATGGTTTGAGCCTGCAGGGTGAAAGCGCTCATGGCACTGGCCATCGCCAGCCAAGGCAGAATTTTGTGGGGCAT
Protein sequence:
MPHKILPWLAMASAMSAFTLQAQTMTDSELLLGSYTQGASEGIYRFGFDSKTGMISPKPLQVIKTENPSWLTVSKDQRYLFVVNENGPGQTDTVGKVSSFSIEPKTFKVAPINQVETKGEEPTHSSLSKDGRYLFVANYAVNPDPGGALSVMPVGKNGQLSDAVQVLPLGPGSKVNPERQASSHVHLAVPTPDGNYVVTADLGADKLFVYRYNADQAKPLQPAKVPTVQLPAGSGPRHVLFSSDGKHAWLVLEMSAQVVVFDYLDGGFKQTQILDMKNKGVDQKNGGGALHASPDGKFLYVTNRGEANQVVVFRIDPASGKLEEIQRRTVEGKEPREFSFDPSGRFMLFANQKSNQIVTVRRDPQTGMIGETVQKLDVDAPSYVHFLSDK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42484.2 | 390 | 7.11 | -0.35 | 29.87 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR019405,IPR011045,IPR015943
Pfam: PF10282
SMART:
KEGG:
PRINTS: