Effector profile
PlantPEAD ID: PlantPEAD31787 Uniprot ID: A0A3M4LUM8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 36746 Pathogen type: Bacteria
Species: Pseudomonas cichorii Strain: ICMP 3353 Other name:
Gene name: NCBI Gene ID: RBRE01000056
Entry name: A0A3M4LUM8_PSECI Protein name: 3-carboxymuconate cye
DOI:
Gene/Protein information
Gene sequence:
TCAATCGTCGGTCAGGAAATGCAGATCCGAAGGCGAATCGAAATCGACTTTCTGCACCGTTTCTCCGAGCATGCCGGTCTGAGGATCGCGGCGCAGCGTGACGATCTGGTTGCTCTTCTGGTTGGCAATCAGCATGAAGTTGCCGCTCGGATCGAAGCTGAACTCACGTGGTTCAGTCCCTTCCACCGAACGACGCTGTAGCTCTTCGAGCGCGCCTGTGGTCGGATCGATGCGGAACACCAGCAACTGGTTGGCTTCACCACGGTTGGCGACATACAGGAAGCGGCCATCGGGTGAAGTATGCAGCCCGCCAGCGCCATTACGCTGCTGCACGCCCTGGTTTTTCAGGTCGACCAGTTGAGTCTGCTTGAACTCACCGTCCAGATAGTCGAACACCGCGACCTGAGCCGACATTTCCAGAACCAGCCAGGCATGCTTGCCCTCAGGGCTGAACAGGATATGTCGTGGTCCACTGCCCGCGGGCAACTGCACCGATGGCGTACTGGCCGGCTGCAAGGGTCTGGCCTGACTGCCGTCGTAGCGATACACGAACAACTTGTCGGCCCCCAGATCGGCAGCGACTACATACTTTCCATCGGGCGTCGGCACCGCCGCATGCACATGAGAAGACATCTGGCGCTCCGGGTTGACCTCGCTGGCCCGATTAGGCCCGGCCACCTGAACCACCTCCTGAAGCTTGCCGTCCTTGCCGACCGGCACTACTGCCAGCGAGCCGCCCGGATCGGGGTGGACCGCATAATTGGAAACCAGCAGAAAACGCCCGTCAGCACTCAGACTCGAATGCGTGGGCTCTTCGCCCTGGCTCTTGACCTGATTGATGGGCGTCACCTGATGGGTCTTGGCAGCAATGGCAAAACTGCTGACCTTGCCCACCACATCACTCTGCCCCGGCCCGTTCTCGTTGACCGCATACAGGTAGCGGCCATTGCTGGAAACCGTCAGCCAGGAAGGATTTTCAGCACGAATGACCTGGCGCGGCGCGGTATCGATCTTGCCCGTCTGGGTGTTGAAGCCGAAACGGTAGATCCCTTCACTCTTGCCCTGGGTATAGGAACCCACCAGCAAATCGGTATCGGACATGGTCTGGGCCTGAACAGGGAAAACACTGAGTGCACTGGCAAGCGCCAGCCACGGCAAAAACGCAGGAGTCATAGGGGCATTCCTTTCTTGTTTGAAATTATGGGTGCCGACTACGCGACAGTCGGTGTAAGACAC
Protein sequence:
MSYTDCRVVGTHNFKQERNAPMTPAFLPWLALASALSVFPVQAQTMSDTDLLVGSYTQGKSEGIYRFGFNTQTGKIDTAPRQVIRAENPSWLTVSSNGRYLYAVNENGPGQSDVVGKVSSFAIAAKTHQVTPINQVKSQGEEPTHSSLSADGRFLLVSNYAVHPDPGGSLAVVPVGKDGKLQEVVQVAGPNRASEVNPERQMSSHVHAAVPTPDGKYVVAADLGADKLFVYRYDGSQARPLQPASTPSVQLPAGSGPRHILFSPEGKHAWLVLEMSAQVAVFDYLDGEFKQTQLVDLKNQGVQQRNGAGGLHTSPDGRFLYVANRGEANQLLVFRIDPTTGALEELQRRSVEGTEPREFSFDPSGNFMLIANQKSNQIVTLRRDPQTGMLGETVQKVDFDSPSDLHFLTDD
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
44654 411 5.82 -0.382 34.31
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.