Effector profile
| PlantPEAD ID: PlantPEAD31855 | Uniprot ID: C9SA37 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1051613 | Pathogen type: Fungi |
| Species: Verticillium alfalfae | Strain: strain VaMs.102 / ATCC MYA-4576 / FGSC 10136 | Other name: Verticillium wilt of alfalfa,Verticillium albo-atrum |
| Gene name: | NCBI Gene ID: DS985215 | |
| Entry name: C9SA37_VERA1 | Protein name: YkgB | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGTTCATCCCTTCAGTCCCTCCTTGCCGGCTCGGCCCTCTGGGCTTCGGCCGGTGCTGTCACTCTTTTCGCCGCTGATTCGGGGGGTAACGTGACGACTCTTTCCCTCACTGGCTGCAGCAATAATTACACTCTCTCTGTCACCTCTAAGACGGCCGATTGTGAGGTCAACCCTTCCTGGCTGACGCTTGACGGGCCCAACCGAGTGCTGTACTGCTACGACCGCGGTGCCGGTTCCTCTGTGTCCGGTTCCCTCAACTCCTTCGCCATTGGAGAAGACGGTCTTTTGTCTCGTATTGCGCGTGTCAGTGCCCCTCTCAGCGGAGTCGCTGGTGAGATCTTGACAACCTCTACTGGTGCTCGGGGTTACATCTCGGCCTCATACAACCGCAGTGCCGCTGCCGTCTTTGCACTTGGCGACGATGGCGCCCTTCCTGGTACGGGCCCCGTCCAGGTGCTCAACCCCACACTCGAGAAGACAGGCCCTGTCACCCTGCGCCAGGACCGCAGCTACCTTCACCACGTCATCATTGACCCCACAAATGAGTATGTGCTCATTCCTGATCTCGGCGGTGACCGTGTTCGCGTCTACACGTACGACCCTGTGACAGTCGCTCCTATCGCCGAGGTGGCCGGACTTACGGCCCCGCCCGGCTCCGGTCCCCGCCACGGTTTCTTCCGCAAGGCCCGCAACGGGAAGACCTTCTTCTTCTTCAACGGCGAGCTTGACCAGAAGGTCTACTCGTACTCTGTCGAGTACACTGCTGCCGGTCTTGTCTTCACCCATGTCTTTGACGCCCCGGCCATTGATGCCGCGCTGCCTGCCACCAGGGCTCCCACGAGCGAGATCGCTCTGAGCCCTGACGGCCGCTTCCTCACCGTGTCCAACCGTGAGAAGTCGTTCCGCGACTCCCCTATCCTCGGCACCGGCCCCTCGGACACCCTGTCCACGTTCTCCATCAAGGAGGACGGCACACTCAAGCTCGTTCAGCTCGCTCCTTCGGGCGGATGGTCGCCTCGCCAGTTCTCCTTCAATAAGGCCGGTACCCTTGTTGCCGTCGGTCACCAGAACAACCGTACCGTGACCATCTGGAAGCGCGACGTCCGGTCTGGCAAGATCGTGCTTGAGGAGGATGGCGGCAAGGTCGGTGAGGTTGTGCTCACTGGTGCTGTCGTTGCTACCATTTGGGACGAGTAG
Protein sequence:
MRSSLQSLLAGSALWASAGAVTLFAADSGGNVTTLSLTGCSNNYTLSVTSKTADCEVNPSWLTLDGPNRVLYCYDRGAGSSVSGSLNSFAIGEDGLLSRIARVSAPLSGVAGEILTTSTGARGYISASYNRSAAAVFALGDDGALPGTGPVQVLNPTLEKTGPVTLRQDRSYLHHVIIDPTNEYVLIPDLGGDRVRVYTYDPVTVAPIAEVAGLTAPPGSGPRHGFFRKARNGKTFFFFNGELDQKVYSYSVEYTAAGLVFTHVFDAPAIDAALPATRAPTSEIALSPDGRFLTVSNREKSFRDSPILGTGPSDTLSTFSIKEDGTLKLVQLAPSGGWSPRQFSFNKAGTLVAVGHQNNRTVTIWKRDVRSGKIVLEEDGGKVGEVVLTGAVVATIWDE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42045.2 | 399 | 6 | -0.03 | 29.28 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR019405,IPR011045,IPR015943
Pfam: PF10282
SMART:
KEGG: val:VDBG_02359
PRINTS: