Effector profile
| PlantPEAD ID: PlantPEAD31858 | Uniprot ID: A0A444RRR9 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 27337 | Pathogen type: Fungi |
| Species: Verticillium dahliae | Strain: Getta Getta | Other name: Verticillium wilt |
| Gene name: | NCBI Gene ID: RSDZ01000099 | |
| Entry name: A0A444RRR9_VERDA | Protein name: YkgB | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGTTCATCCCTTCAGTCCCTCCTTGCCGGCTCGGCCCTCTGGGCTTCGGCCGGTGCTGTCACTCTTTTCGCCGCTGATTCGGGGGGTAACGTGACGACACTGTCCCTCACTGGCTGCACCAATAATTACACTCTCTCTGTCACCTCCAAGACGCGCGACTGTGAGGTCAACCCTTCCTGGCTGACGCTTGACGGGTCCAACCGAGTGCTGTACTGCTACGACCGCGGTGCCGGCTCCTCTGCGTCCGGTTCTCTCAACTCCTTCTCCATTGGAGAAGACGGTCTGCTGTCTCGTATTGCGCGTGTCAGTGCCCCTCTCAGCGGAGTCGCTGGTGAGATCCTGACAACCTCTACTGGTGCTCGGGGTTACATCTCGGCCTCATACAACCGCAGTGCCGCTGCCGTCTTTGCGCTTGGCGACAATGGCGCCCTTCCTGGGACGGGCCCCGTCCAGGTGATCGACCCGACACTCGAGACGACTGGTCCAGTCACTCTGCGCCAGGACCGCAGCTACCTTCACCACGTCATCATCGACCCCACGAATCAGTATGTGCTCATTCCTGATCTCGGCGGTGACCGTGTTCGCGTCTACACGTACGACCCTGTGACAGTCGCTCCTATCGCCGAGGTGGCCGGACTTGCGGCCCCGCCCGGCTCCGGTCCCCGTCATGGTTTCTTCCGCAAGGCCCGCAACGGCAAGACATTCTTCTTCTTCAATGGCGAGCTTGACCAGAAGGTCTACTCGTACTCTGTCGAGTACACAGCTGCCGGCCTTGTCTTCACCCACGTCTTTGACGCCCCGGCCATCGATGCCGCGCTGCCTGCCACCAGAGCGCCCACGAGCGAGATCGCTCTGAGCCCTGACGGCCGCTTCCTCACCGTATCCAACCGTGAGAAGTCGTTCCGCGACTCCCCCATCCTCGGCTCCGGCCCCTCGGACACCCTGTCAACGTTCTCCATCAAGGAGGACGGCACCCTGAAGCTCGTCCAGCTCGCTCCTTCGGGCGGATGGTCGCCTCGCCAGTTCTCCTTCAACAAGGCTGGTACTCTCGTTGCCGTCGGCCACCAGAACAACCGTACCGTGACCATCTGGAAGCGCGACGTCCGGTCTGGCAAGATCGTGCTCGAGGAGGACGGCGGCAAGGTCGGCGAGGTTGTGCTGACTGGCGCTGTCGTCGCTACCATTTGGGACGAGTAG
Protein sequence:
MRSSLQSLLAGSALWASAGAVTLFAADSGGNVTTLSLTGCTNNYTLSVTSKTRDCEVNPSWLTLDGSNRVLYCYDRGAGSSASGSLNSFSIGEDGLLSRIARVSAPLSGVAGEILTTSTGARGYISASYNRSAAAVFALGDNGALPGTGPVQVIDPTLETTGPVTLRQDRSYLHHVIIDPTNQYVLIPDLGGDRVRVYTYDPVTVAPIAEVAGLAAPPGSGPRHGFFRKARNGKTFFFFNGELDQKVYSYSVEYTAAGLVFTHVFDAPAIDAALPATRAPTSEIALSPDGRFLTVSNREKSFRDSPILGSGPSDTLSTFSIKEDGTLKLVQLAPSGGWSPRQFSFNKAGTLVAVGHQNNRTVTIWKRDVRSGKIVLEEDGGKVGEVVLTGAVVATIWDE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42050.2 | 399 | 6.24 | -0.041 | 29.67 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR011048,IPR019405,IPR015943
Pfam: PF10282
SMART:
KEGG:
PRINTS: