Effector profile
PlantPEAD ID: PlantPEAD31951 Uniprot ID: A0A0N7L5Q3 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 4781 Pathogen type: Oomycota
Species: Plasmopara halstedii Strain: Other name:
Gene name: NCBI Gene ID: CCYD01000610
Entry name: A0A0N7L5Q3_PLAHL Protein name: RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains
DOI:
Gene/Protein information
Gene sequence:
ATGGGGGGTCACGACCACCATCGCGAGGGTCACAAGAGCTCGCGATCGGGTTCATGGGAAGGCTTTGACAAGATGAAGCAAGCACTAGATGGTCTGGCTACAGCAAAGGGCGTATCACAAAGCCGCATTGGTGCCGTAGCCAAGTTGGCAGCACATTACTCGAAGTTTTACAAGCACGTAGTGCATGACATTGAAATGTTTTTGTGGAAGGCAGAAGTTGAGCACCGATTGGCTGGGCTTTATGCTATTGACGCCATTATCAGACATTCTCATGCGAATAACGACCCGAAGGAGTCATATGTAAAGCGATTTTTTGTTCGTATGTCCGACACGATTGCCGCAGTAAAAAAAGTGCCAGAACAATTGCAGCCCAAAGTTCGGCATGTGATTGATGAATGGCAGAAGCGTGGAATTTATACATCCAAGCAGATTGAAGATGTTGGTGGACGTGAATATCTTTCCCAAGGACAGTCAGAAAATCTTACGCCTCGTACATCTCCGGGAAAGTTAGCGTCATTACTATCAATTATCAAGCAGAAAAGAGAGGAGAACGAGCAGGCCAGTGAGCAACATGGGCAACCACGGATCAACAACTCTCATCATAACGGACGACTGCAAAAAGATAACATTGAAGGATTGAGCCATCAAAGTTATAGTGAGCGACAACTCGATGACAAACGAAGTGTCGGAATTATGGGTGATGCACCTAATCTTTATATCGGAAGCAATCACATGCAGAGGAATATAAACGAACGTCCTGATGATTGTAACGATCGTGATTTAAAAAAGGCTCGTGGATCCCGATGGGGTCCGCCTAAAATGGACAAAGTTCCTTCAAACGATAGACCAACTCCAGTAATTACGTCTTCTGAACGGGACGGAAATTATCGTTTTGATAATAGCTCTGTTCAGGGCTTAACATCAGGATCATCTTATCAGCCTTCTTTGTTACAAACTCCCCATGGAGGCCCACCAAGACATGAAGATTGGAACAGAAATACACCTTCTCTTAGCACTGGCACAGAGTGGCCGCGTGATAACATGCTCTCTCCGCAACAAGGAGGCCTTATTAGACAGAATGCAAACCCATTCCAGCAGGGCGGAATGCAACCGATGCCATTTACTGGCTCCGACGATCGACGAAGTCCTGGCCACCGCGTGCCTGGAACTTCTGGGGAGGTTTGTCGCAATTATTTAGCAGGAAGATGCTCTTTTGGTGATCGTTGCTGGCACATTCATGACCCTCAGGCCGCTCCGTCCGTTGCAAGTCGTTCAGAATTTGCTGAAAGTAAGCACAAAACTGTGCTATGTAACAATTTCCCGCTGGGAACGTGTCGTTTTGGAGATAAATGCAGCTTTGCTCATGGAGAAGAAGAGTTAGAAAAGTCGAAGCGATACCCGTTAAGACCCACTGCTCAAAATGATGCACTAAATGGAGGCCGCTGGCAACCGTCGCCCGGTTTGCGACAAGGCATGGAGCCGACAAATGTTTACGTTAATGTACTCGCTCCTTCCTCTCAAGCTAGATCTTACGGAAATCCGCAAGTATATAATGAACAACACGGTGACCGAGGCATTAAAGGAGACGATTCTTCTGTATCTTATGCTAAAAATGCCACCTCGCCTTCGTTGAGTGTACACCGATTGCCGCCACAAGTCCATTCAGCAGCACCTCCACCGGTCTATCAGGGGTCATACCCTTCGGTTCCATATGGTGCTGCTATTGGTAGCATGACTTTTGCGAATCAAGGTCCATCTTACTCCAACGGAGACCAAGATCGGACCCATGTCTCATCTAATGTCCCCGTCTTACCATCTCCTGCATCTAATAGTCAATCTTATGGAGACCAGCCAACCCCTAGCACCAAAGTCCTAGCTGATGATGACGAAGTCGAAACGGCTGAGCCTGAATTTACTCTCGAGTACGATGACGACGACTAA
Protein sequence:
MGGHDHHREGHKSSRSGSWEGFDKMKQALDGLATAKGVSQSRIGAVAKLAAHYSKFYKHVVHDIEMFLWKAEVEHRLAGLYAIDAIIRHSHANNDPKESYVKRFFVRMSDTIAAVKKVPEQLQPKVRHVIDEWQKRGIYTSKQIEDVGGREYLSQGQSENLTPRTSPGKLASLLSIIKQKREENEQASEQHGQPRINNSHHNGRLQKDNIEGLSHQSYSERQLDDKRSVGIMGDAPNLYIGSNHMQRNINERPDDCNDRDLKKARGSRWGPPKMDKVPSNDRPTPVITSSERDGNYRFDNSSVQGLTSGSSYQPSLLQTPHGGPPRHEDWNRNTPSLSTGTEWPRDNMLSPQQGGLIRQNANPFQQGGMQPMPFTGSDDRRSPGHRVPGTSGEVCRNYLAGRCSFGDRCWHIHDPQAAPSVASRSEFAESKHKTVLCNNFPLGTCRFGDKCSFAHGEEELEKSKRYPLRPTAQNDALNGGRWQPSPGLRQGMEPTNVYVNVLAPSSQARSYGNPQVYNEQHGDRGIKGDDSSVSYAKNATSPSLSVHRLPPQVHSAAPPPVYQGSYPSVPYGAAIGSMTFANQGPSYSNGDQDRTHVSSNVPVLPSPASNSQSYGDQPTPSTKVLADDDEVETAEPEFTLEYDDDD
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
71615.9 646 7.16 -0.957 59.52
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.