Effector profile
| PlantPEAD ID: PlantPEAD31989 | Uniprot ID: Q1WIM4 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 109152 | Pathogen type: Oomycota |
| Species: Phytophthora boehmeriae | Strain: SCRP23 | Other name: |
| Gene name: Ypt1 | NCBI Gene ID: DQ270324 | |
| Entry name: Q1WIM4_9STRA | Protein name: Ras-related protein Ypt1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
GACTTTAAAATCCGTACGATTGAGCTCGACGGCAAGACCATCAAGCTGCAGATTTGGGACACTGCTGGCCAGGAGCGTTTCCGCACCATCACTAGCAGTTACTACCGTGGCGCCCACGGCATCATCGTAGTGTACGATGTGACGGACCAGGAGTCGTTCAATAACGTCAAGCAGTGGCTGCACGAGATTGATAGATACGCCTG
Protein sequence:
DFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 7950.91 | 67 | 6.08 | -0.563 | 23.77 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR005225,IPR001806
Pfam: PF00071
SMART: SM00175
KEGG:
PRINTS: