Effector profile
| PlantPEAD ID: PlantPEAD32044 | Uniprot ID: A0A2N5V3T0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 27344 | Pathogen type: Fungi |
| Species: Puccinia coronata | Strain: f. sp. avenae strain 12NC29 | Other name: |
| Gene name: | NCBI Gene ID: PGCJ01001048 | |
| Entry name: A0A2N5V3T0_9BASI | Protein name: GTP-binding protein ypt3 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGACTCAAAGTCGACAATCGGGGTAGAGTTTGCAACCCGCAGCATCTCGGTCGATAGCAAAACCATCAAAGCGCAGATCTGGGACACTGCGGGTCAAGAACGATACAGAGCTATCACTTCGGCCTACTACCGCGGTGCGGTGGGAGCCTTACTCGTGTACGACATCTCCAAACACCCCACCTATGTGAACGTGCAGCGATGGTTGAAGGAACTCCGAGACCATGCGGACAGCAACATTGTCATCATGCTGGTCGGGAACAAGAGCGATTTGAGACACCTGAGGGCCGTCCCCACGGAAGAAGCACAGGCTTTCGCCACAGAAAATAACCTCAGCTTTATCGAAACCTCGGCCATGGATGCTAGCAATGTCGAAACCGCGTTCCAAAATATCCTTACTGACATTTACCGGATTGTGTCGAGCAAAGCGCTCGAGTCATCGGCGGACGCTGTTGGGCCCACATCGGGCTCCACAATCACTGTGACTCCGACTGCCGACGACGCCTCAAAAGCAAGCGGCAGCGGGAAGTGTTGCTGA
Protein sequence:
MDSKSTIGVEFATRSISVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSADAVGPTSGSTITVTPTADDASKASGSGKCC
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19243.5 | 178 | 5.6 | -0.211 | 31.97 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR005225,IPR001806
Pfam: PF00071
SMART: SM00175,SM00176,SM00173,SM00174
KEGG:
PRINTS: PR00449