Effector profile
| PlantPEAD ID: PlantPEAD32046 | Uniprot ID: A0A5B0N6T9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 5297 | Pathogen type: Fungi |
| Species: Puccinia graminis | Strain: f. sp. tritici strain 21-0 | Other name: Black stem rust fungus |
| Gene name: RAB11B | NCBI Gene ID: VSWC01000118 | |
| Entry name: A0A5B0N6T9_PUCGR | Protein name: Ras-protein Rab-11B | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGGTGATGCTACCTCCTACGACTTCTTATTCAAAGTCGTCCTCATCGGTGACTCGGGCGTCGGAAAATCTAACCTACTCTCGCGATTTACTAGGAATGAATTCAACATGGATTCCAAGTCTACGATCGGTGTCGAGTTTGCAACCCGCAGTATTTCGGTCGATGGAAAGACGATCAAAGCGCAAATCTGGGATACTGCTGGTCAAGAGCGATACAGAGCGATCACATCGGCCTACTACCGAGGCGCAGTAGGCGCCTTACTAGTCTACGACATCTCCAAACATCCCACCTACGTTAACGTCCAACGATGGTTGAAAGAACTCCGAGATCATGCCGATAGTAACATCGTGATCATGCTCGTCGGTAATAAGAGCGATTTGAGACATCTTAGGGCGGTCCCGACCGAGGAGGCTCAAGCATTCGCCACTGAAAACAACTTGAGCTTCATCGAAACTTCGGCCATGGATGCTAGTAATGTCGAAACCGGTCAGTCACCCCTATTCATCCCCCTCCTCCTATCTTGA
Protein sequence:
MGDATSYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAQAFATENNLSFIETSAMDASNVETGQSPLFIPLLLS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19285.8 | 174 | 5.91 | -0.145 | 33.74 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR005225,IPR001806
Pfam: PF00071
SMART: SM00175,SM00176,SM00173,SM00174
KEGG:
PRINTS: PR00449