Effector profile
| PlantPEAD ID: PlantPEAD32065 | Uniprot ID: A0A178F327 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 5551 | Pathogen type: Fungi |
| Species: Trichophyton rubrum | Strain: CMCC(F)T1i | Other name: Athlete\'s foot fungus |
| Gene name: | NCBI Gene ID: LHPM01000012 | |
| Entry name: A0A178F327_TRIRU | Protein name: GTP-binding protein ypt3 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTAACGACGAATACGATTTCCTATTTAAGGTGGTGCTTATCGGAGATTCTGGAGTCGGCAAGTCTAATCTGCTGAGCCGATTCACGCGCAATGAATTCAACCTCGATTCCAAGTCCACCATTGGTGTAGAGTTCGCTACTCGATCTATCCAAGTTGACTCAAAAACCATCAAATCTCAGATCTGGGATACTGCTGGACAGGAACGATATCGCGCCATAACCTCCGCTTACTATCGTGGCGCTGTTGGCGCTCTTCTTGTTTACGATGTCAGCAAGCATCAGACCTACGAGAACGTTACTCGATGGTTGAAGGAGCTACGGGATCACGCCGACTCGAACATCGTCATCATGCTGGTCGGAAACAAGAGCGATCTTAGACATTTGCGGGCTGTGCCCACTGAGGAGGCCAAACAATTTGCGAGTGAAAATAACTTATCTTTCATTGAGACTTCTGCCTTGGACGCAAGCAATGTCGAGCTTGCCTTCCAAAATATTCTCACTGAAATTTTCCGCATTGTATCAAGTAAGGCCCTTGAAAGTGGCGATTCTTCCGCAAACCAGCTCGGCGACCGCAAAGTCGTGGAAATTACCAAAACCCCAGACTCCGAGAAGAAACAAGGATTTTTTTACTACATGTATACTCCTACTGGCCATGCTGATATCAAGACTGCGTTCCTGTCCAGCTCGTCACGATCGAAAGCCATCCTTACAATCGATCGAAAACTTTAA
Protein sequence:
MANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESGDSSANQLGDRKVVEITKTPDSEKKQGFFYYMYTPTGHADIKTAFLSSSSRSKAILTIDRKL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 27274.7 | 243 | 6.93 | -0.349 | 43.53 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR005225,IPR001806
Pfam: PF00071
SMART: SM00175,SM00176,SM00173,SM00174
KEGG:
PRINTS: PR00449