Effector profile
| PlantPEAD ID: PlantPEAD32202 | Uniprot ID: S6W322 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. actinidiae ICMP 18807 | Other name: |
| Gene name: | NCBI Gene ID: AOKG01000455 | |
| Entry name: S6W322_PSESF | Protein name: Type III effector HopA1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAACCCCATTCAGTCACGCTTCTCCAGTGTGCAAGAGCTCAGACGATCCAACGTTGATATTCCGGCGCTCAAAGCCAATGGCCAACTGGAGGTCGACGGCAAGAGGTACGAGATACGTGCAGCCGATGACGGAACAATCTCGGTCCTTCGACCGGAACAACAATCCAAAGCGAGAAGTTTTTTCAAAGGCGCTTCTCAGTTGATAGGTGGCAGCAGCCAGCGCGCGCAGATTGCCCAGGCGCTCAACGAGAAGGTCGCATCGGCACGCACTTTCTTGCACCAGAGCGCTATGACGGGCGGACGCTTTGACACCCTTGAGCGGGGCGAAAGCAGCTCAGCCACAACAGCCATCAAACCCACTGCCAACCAGGCTGCGCAAAGTACTTTTAACAGCTTTCATGAGTGGGCCAAGCAGGCAGAGGCGATGCAAAACCCGTCTCGGATGGATATCTACAAGATCTATAAACAAGATGCACCTCACTCACACCCCATGAGCGACGAGCAGCAAGAAGAGTTCCTGCACACGCTAAAGGAGTTGAATGGCAAAAAGGGTATTGAGGTGCGCACCCAGGACCACGACAACGTCAGAAATAAAAAAGACCGCAACCTGGACAAGTACATTGCCGAGAGCCCAAACGCAAAGAAGTTCTTCTATCGAATCACCCCCAAACATGAGCGCCGAGAAGATAAGCATCAAGGGCGATTGACCATTGGCGTGCAACCCCAATATGCAGCACAGCTGACCCGCGCCATGGCAACCCTGATAGAGAAAGAAAGTGCAATCACGCAAGGCAAAGTAATAGGCCCCGCCTACCACGGCCAAATGACTGATTCGGCAGTCTTGTATATCAACGGTGATGTTGCAAAAGCGGAAAAACTGGGCGAGAAACTGAAACAGATGAGCGGCATTCCTCTGGATGCGTTCATTGAGCACACCCCTATGAGCATGCAGCCCTTGAGTAAAGGTGTGTCCTATGCAGAAAGCATCCTGGGAGACACCAGAGGCCATGGGATGTCGCGTGCAGAAGTGATCAGTGATGCCTTGAGGATGGACGGGATGCCATTTCTGGCCAGACTAAAGCTATCACTGTCTGCCAATGGCTATGACCCGGACAACCCGGCCCTTCGAAACACGAAATGA
Protein sequence:
MNPIQSRFSSVQELRRSNVDIPALKANGQLEVDGKRYEIRAADDGTISVLRPEQQSKARSFFKGASQLIGGSSQRAQIAQALNEKVASARTFLHQSAMTGGRFDTLERGESSSATTAIKPTANQAAQSTFNSFHEWAKQAEAMQNPSRMDIYKIYKQDAPHSHPMSDEQQEEFLHTLKELNGKKGIEVRTQDHDNVRNKKDRNLDKYIAESPNAKKFFYRITPKHERREDKHQGRLTIGVQPQYAAQLTRAMATLIEKESAITQGKVIGPAYHGQMTDSAVLYINGDVAKAEKLGEKLKQMSGIPLDAFIEHTPMSMQPLSKGVSYAESILGDTRGHGMSRAEVISDALRMDGMPFLARLKLSLSANGYDPDNPALRNTK
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42259.6 | 380 | 9.35 | -0.714 | 44.74 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR040871
Pfam: PF17914
SMART:
KEGG:
PRINTS: