Effector profile
PlantPEAD ID: PlantPEAD32203 Uniprot ID: A0A3M4U612 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. coriandricola strain ICMP 9829 Other name:
Gene name: NCBI Gene ID: RBTT01000507
Entry name: A0A3M4U612_9PSED Protein name: Type III effector HopA1
DOI:
Gene/Protein information
Gene sequence:
TCATTTCGTGTTTCGAAGGGCCGGGTTGTCCGGGTCATAGCCATTGGCAGACAGTGATAGCTTCAATCTGGCCAGAAATGGCATCCCGTCCATCCTCAAGGCATCGCTGATCACTTCCGCTCGCGACATCCCATGGCCTCTGGTGTCGCCCAGGATGCTTTCTGCATAGGACAGACCTTTACTCAGGGATTGCATGCTCAAAGGGGTGTGCTCAACGAACGCATCCAGAGGAATGCCGCTCATCTGTTTCAGTTTCTCGCCCAGCTTTTCTGCCTTTGCAACATCACCGTTGATATACAAAACTGCCGAATCGGTCATTTGGCCGTGGCAGGCGGGGCCTATTACTTTGCCATGCGTGATTGCACTTTCCTTCCCTATCAGGGTTGCCATGGCGCGGGTCAACTGTGTTGCATATTGGGGTTGCACGCCAATGGTCAATCGCCCTTGATTCTTATCTTCTCGGCGCTCATGTTTGGGGATAATTCGATAGAAAAACCTCTTTGCATCCGGGCTCTCTGCGATGTACTTGTCCAGGTTGCGGTCTTTTTTATTTCTGACGCTGTCGTGGTCCTGAGTGCGCACCTCAATGCCGTTTTTGCCATTCAATGCCTTTAGCGTGTGCAGGAACTCTTCTTGCTGCTCGTCGCTCATGGGGTGTGAGTGAGGTGCATCTTGTTTATAGATCTTGTAGATATCCATTCGAGACGGGTTTCGCATCGCCTCTGCCTGTTTGGCCCACTCATGAAAGCTGTTAAAAGTACTTTGCGCAGCCTGTTTGGCAGTGGGTTTGATGGCTGTTGTGGCTGAGCTGCTTTCGCCCCGCTCAAGGGTGTCCAAGCGTCCGCCCGTCACAGTGCCCTGGTGCAATACAGTTCGTGCCGATACGACTTTCTCGTTGAGCGCCTGGGCAATCTGCGCGCGCTGGCTGCTGCCACCTATCAACTGAGAAGCGCCCTTGAAAAAACTTTTCGCCTTGGACTGTTGCTCCGGTCGAAGGACCGAAATTGTTCCGTCATCGGCTGCACGAATCTCGTACCTCTTGCCGTCGACCTCCAGTTGGCCATTGGCTTTGAGCGCCGGAATATCAACGTTGGATCGTCTGAGCTCTTGCACACTGGAGAAGCGTGACTGAATGGGGTTCAT
Protein sequence:
MNPIQSRFSSVQELRRSNVDIPALKANGQLEVDGKRYEIRAADDGTISVLRPEQQSKAKSFFKGASQLIGGSSQRAQIAQALNEKVVSARTVLHQGTVTGGRLDTLERGESSSATTAIKPTAKQAAQSTFNSFHEWAKQAEAMRNPSRMDIYKIYKQDAPHSHPMSDEQQEEFLHTLKALNGKNGIEVRTQDHDSVRNKKDRNLDKYIAESPDAKRFFYRIIPKHERREDKNQGRLTIGVQPQYATQLTRAMATLIGKESAITHGKVIGPACHGQMTDSAVLYINGDVAKAEKLGEKLKQMSGIPLDAFVEHTPLSMQSLSKGLSYAESILGDTRGHGMSRAEVISDALRMDGMPFLARLKLSLSANGYDPDNPALRNTK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
41985.4 380 9.45 -0.652 41.85
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.