Effector profile
| PlantPEAD ID: PlantPEAD32266 | Uniprot ID: A0A2K0WN01 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 42673 | Pathogen type: Fungi |
| Species: Gibberella nygamai | Strain: CS10214 | Other name: Bean root rot disease fungus,Fusarium nygamai |
| Gene name: | NCBI Gene ID: MTQA01000053 | |
| Entry name: A0A2K0WN01_GIBNY | Protein name: Postreplication repair E3 ubiquitin-protein ligase RAD18 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGAAGACGCTGTGCAAGCATTCATCAATGCCAGACCAGCAACACTAGAGCTAGCGCGAAACGCAGATACCAATAAGACAAGCTCGAAACGAAAGGCGATCCAAGATCATCATGAGTCGGGGGATGCACCAGATGGCAAGCGACTACGGTCATCCACGCGACTGCGCAACACTCGCTCCCACCCCTCATATACAGTTCCTGCTGAAGAAGACGAGACTGTCCAAGTCTCAGAGGGTGATGAGGATTTTCAACCGGAGCCAGAGGACGGCCTTGTCGCGTGCCCAGTTTGCGAAAGTCGAATGAAGGAATGGCAGGTTTTCAAGCACCTCGAGACATGTACAGGACATGTACAAAGACCACGGGGAACTCCTGGCAGTAGTTCAAATACCAGCTTCAGCCAACAACGACCTCAGACCAAGGCTCCGGACCGCCTCCCTGCAATAAATTACTCCATGTTCAAAGACCAAGCTTTGCGAAAAAAGATGTCTGATCTTGGTATTTCAAATCAGGGCCCTCGATTTCTTCTAGAGCGCCGACATAAAGAGTGGATGACAATATGGAACTCAAACTGCGACGCTGCACGCCCAAGGAAACGTCACGAATTGTTACATGATTTGGATGTCTGGGAACGGACACAAGGAGGACGAGCTCCAACAACAGGGCGATCTATACAGAATGCAGCAATCATCAAAGACAAAGACTTTGACGGTGCAGCATGGGCAGCTAAACATGACTCGTCCTTCAAAGACCTGATTGCAAATGCAAAGAGGACTAGGCTTGAGGCCAAAAAGAAAGCCGAAGAGGCTGCTAACGAGTCGAAAATGGACGGAAGTACAACAACACAGGAGAACCGCGATCGAATGCAAGACCATTCTGCAGACTGGCGGGCTGTGTCAAGACCCTCGGCTTTTCCAACAAGACTGGCTGAAGGAATCCCAGGTCGGCCGTCGCATTCCGATAGCCCATCGCCTGAACCATCGCACTCTCAATCCAAGGGCCACCAAGAAAGCAATAGGGACTCGAGCAAACATCCCCCAGACACCCGCAGGGACAGGTTCTCACAAGACTGA
Protein sequence:
MEDAVQAFINARPATLELARNADTNKTSSKRKAIQDHHESGDAPDGKRLRSSTRLRNTRSHPSYTVPAEEDETVQVSEGDEDFQPEPEDGLVACPVCESRMKEWQVFKHLETCTGHVQRPRGTPGSSSNTSFSQQRPQTKAPDRLPAINYSMFKDQALRKKMSDLGISNQGPRFLLERRHKEWMTIWNSNCDAARPRKRHELLHDLDVWERTQGGRAPTTGRSIQNAAIIKDKDFDGAAWAAKHDSSFKDLIANAKRTRLEAKKKAEEAANESKMDGSTTTQENRDRMQDHSADWRAVSRPSAFPTRLAEGIPGRPSHSDSPSPEPSHSQSKGHQESNRDSSKHPPDTRRDRFSQD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40136.2 | 356 | 8.8 | -1.21 | 58.42 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR039577,IPR004580,IPR006642,IPR003034
Pfam:
SMART: SM00513,SM00734
KEGG:
PRINTS: