Effector profile
| PlantPEAD ID: PlantPEAD32271 | Uniprot ID: A0A420T0H7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 948311 | Pathogen type: Fungi |
| Species: Gibberella intermedia | Strain: Fp_A8 | Other name: Bulb rot disease fungus,Fusarium proliferatum |
| Gene name: | NCBI Gene ID: MRDB01000033 | |
| Entry name: A0A420T0H7_GIBIN | Protein name: Postreplication repair E3 ubiquitin-protein ligase RAD18 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCCAACCATGATGTCCCCGACTCTACAGACTGGCTCACGACGCCACTAACTGCCCTTGCCGTAGTCGAAAGCGCTTTGCGATGTCAAATATGCAAGGACTTCTACAGAACCCCCATGATCACGACTTGCTGCCATACCTTTTGCTCAATATGCATCCGACGAGCTTTGTCCAATGAGGGCAAATGCCCATTGTGTCGCGCATCAGAGCAAGAGCTCAAGTTGCGGAGCAATTGGGCAGTGGAAGAAGCTGTGCAAGCATTCATCAATGCCAGACCAGCAACACTTGACCTGGCGCGAAACGCAAATACCAAGAAGATAAGCTCGAAACGAAAGGCAGTCCAAGATCATCATGAGTCGGGCGATGCACCAGATGGCAAGCGACTACGGTCATCCACGCGATTGCGAAACACTCGGTCCCCCCCCTCATATACAGTTCCTACTGAAGAAGACGAAACTGTCGAATTCTCAGAGGGTGATGAGGATTTTCAGCCAGAGCCAGAGGACGGCCTGGTCGCGTGCCCAGTTTGCGAAAGTCGAATGAAGGAATGGCAGGTTTTCAAGCACCTCGAGACATGTACAGGCCCTGTGCAAAGGCCACGAGGAAATCCTGGCAGTAGTTCAAACACCAGCTTCAGCCAACAGCGACATCAGACAAAGGCTCCGGACCGCCTGCCTGCAATAAATTACTCCATGTTCAAGGACCAAGCTTTGCGAAAGAAGATGGCTGATCTTGGTATTTCAAATCAGGGCCCTCGAATTCTTCTTGAGCGCCGACATAAAGAGTGGATGACGATATGGAATTCAAACTGCGACGCTGCTTGCCCAAGGAAACGTCACGAACTGTTACATGATTTGGATGTCTGGGAACGCACACAAGGAGGACGAGCTCCAACAACAGGGCGATCGATACAGAATGCAGCAATCATCAAGGACAAAGACTTCGACGGTGCAGCATGGGCAGCTAAACATGACTCGTCCTTTAAAGACCTGATTGCAAATGCAAAGAGGACTAGGCTTGAGGCCAAAAAGAAGGCTGAAGAGGCTGCTAATGAGTCGAAAGTGGACGGAAATACAACACCACAGGAGAACAGCGATCGAATGCAAGATCATTCTGCAGACTGGCGGGCTGTGTCAATTCCCTCGTCTTTTCCATCAAGACCGGCGGAAGGAATCCCAGGTCGACCGTCGCATTCCGATAGTCCTTCGCCTGGACCATCGCGTTCTCAGTCTAAGGGCCACCGAGGGAGCAATAGGGATTCAAGCAGACATCCATCAGACACCCGCGAGGACAGGCTCTCACAAGACTGA
Protein sequence:
MANHDVPDSTDWLTTPLTALAVVESALRCQICKDFYRTPMITTCCHTFCSICIRRALSNEGKCPLCRASEQELKLRSNWAVEEAVQAFINARPATLDLARNANTKKISSKRKAVQDHHESGDAPDGKRLRSSTRLRNTRSPPSYTVPTEEDETVEFSEGDEDFQPEPEDGLVACPVCESRMKEWQVFKHLETCTGPVQRPRGNPGSSSNTSFSQQRHQTKAPDRLPAINYSMFKDQALRKKMADLGISNQGPRILLERRHKEWMTIWNSNCDAACPRKRHELLHDLDVWERTQGGRAPTTGRSIQNAAIIKDKDFDGAAWAAKHDSSFKDLIANAKRTRLEAKKKAEEAANESKVDGNTTPQENSDRMQDHSADWRAVSIPSSFPSRPAEGIPGRPSHSDSPSPGPSRSQSKGHRGSNRDSSRHPSDTREDRLSQD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 48807.3 | 436 | 8.51 | -0.955 | 58.08 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR039577,IPR004580,IPR006642,IPR003034,IPR001841,IPR013083,IPR017907
Pfam: PF13923
SMART: SM00184,SM00734
KEGG:
PRINTS: