Effector profile
PlantPEAD ID: PlantPEAD33182 Uniprot ID: A0A145XQ34 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 515393 Pathogen type: Bacteria
Species: Pseudomonas yamanorum Strain: LMG 27247 Other name:
Gene name: NCBI Gene ID: JACARG010000045
Entry name: A0A145XQ34_9PSED Protein name: Type VI secretion system secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
TCAGCGTTTGGTGTTGGAGCGGATGTTCCAGCCAAACTTGATCGCGCCACCGTCTTTGGTGCCGTCGGCTTTCTGTGGCTGGTAGTCCACCATCACCTGGGCAAAGTTCAGGGTGACGTTTTCGGTCAGGCGATCATCGCTGCCCGAGCCGCCGGTGCTCAGGGAGGTCACCAGCACTTCTTCCAGGTTGATGATCATGTACTCGACCTGGCTTTCACCGCCGGCCTTGCGCACGGTCAGGGTGACCTTGTCGATGTGCTTGCCGCTGGCGCAGTGCATCATCAGGTTCGGCGAGGCCTTGTCGACGTACTTGGTCAGCGACAGGTCCTGGATGTTCACCTTGCCCGCGCCGCCGCCACCGCCCACGTGCATGTTGCCGGACTGGGCCATGCCCCAGCTCCAGTTCAATACGTCGATTTCGTCCTTGTGGGCCTTGTCCATGGACTCGCCCTTGATGTCGCCGATCTTGATGAAAATATCAACAGCCAT
Protein sequence:
MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMAQSGNMHVGGGGGAGKVNIQDLSLTKYVDKASPNLMMHCASGKHIDKVTLTVRKAGGESQVEYMIINLEEVLVTSLSTGGSGSDDRLTENVTLNFAQVMVDYQPQKADGTKDGGAIKFGWNIRSNTKR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17489.8 162 6.06 -0.342 39.3
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.