Effector profile
PlantPEAD ID: PlantPEAD33184 Uniprot ID: A0A1B4PVX3 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 292 Pathogen type: Bacteria
Species: Burkholderia cepacia Strain: MSMB1184WGS Other name: Pseudomonas cepacia
Gene name: NCBI Gene ID: CP013443
Entry name: A0A1B4PVX3_BURCE Protein name: Hcp1 family type VI secretion system effector
DOI:
Gene/Protein information
Gene sequence:
TTAAGCAGCGTTCTTCTTGATGTCGAACGTCGCCGTGATTGCGCCACCGCTGCCGCCCTGCGCGTTCTGCACCACGTATTCCTGCTTGAGGCGCGAGAACGACAGACGGACGATCTCGCGAGGACGCGACTCGTCGGCTGCGACGCCCGACGGGCTCACCTGCGTCACCAGCACGTCGTTCATCGTCAGCAGGATGTACTCGAGCGGATTCCCACCTGCCTTACGCACCGTGAGCTTCGCTTCGTCGATGTGCTTGCCCAGCAGACAGTACTGAATCAGGTTCGGGCTCGCCCGGTCGATGAAATGCTCGAATTGCAGATCGTCCACCGTAGCCTTGCCTGCGCCACCGCCCGAGCCGAGGTGCATGTTCGATTGCTGGCTTACGTTCCACGACCAGCTCAAGACCTCGATTTCGTTCTGGTGAGTGGCATCCTTGGATTCACCGTCGATACCGTTGATCTTGAGGAAAATATCGTGTGCCAT
Protein sequence:
MAHDIFLKINGIDGESKDATHQNEIEVLSWSWNVSQQSNMHLGSGGGAGKATVDDLQFEHFIDRASPNLIQYCLLGKHIDEAKLTVRKAGGNPLEYILLTMNDVLVTQVSPSGVAADESRPREIVRLSFSRLKQEYVVQNAQGGSGGAITATFDIKKNAA
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17380.6 160 5.68 -0.279 38.92
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.