Effector profile
PlantPEAD ID: PlantPEAD33187 Uniprot ID: A0A1S1V391 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. 06C 126 Other name:
Gene name: NCBI Gene ID: MIFU01000001
Entry name: A0A1S1V391_9PSED Protein name: Hcp1 family type VI secretion system effector
DOI:
Gene/Protein information
Gene sequence:
ATGGCTGTTGATATCTTCATCAAGATCGGCGACATCAAGGGCGAGTCCATGGACAAGGCCCACAAGGACGAAATCGACGTGCTGAACTGGAGCTGGGGCATGGCCCAGTCCGGCAACATGCACGTTGGCAGTGGCGGCGGCGCGGGCAAGGTGAATATCCAGGACCTGTCGTTGACCAAGTACGTCGACAAGGCTTCGCCTAACCTGATGATGCATTGCGCCAGCGGCAAGCACATCGACAAGGTCAAGCTGACCGTGCGCAAGGCCGGCGGCGAAAGCCAGGTCGAGTACATGATCATCAACCTTGAAGAAGTGCTGATCACGTCCCTGAGCACCGGCGGCTCGGGCAGCGATGATCGCCTGACCGAAAACGTCACCCTGAACTTTGCCCAGGTGATGGTCGACTACCAGCCGCAGAAAGCCGACGGCACCAAGGACGGCGGCCCGATCAAGTTCGGCTGGAATATCCGTTCCAACACCAAGCGTTGA
Protein sequence:
MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMAQSGNMHVGSGGGAGKVNIQDLSLTKYVDKASPNLMMHCASGKHIDKVKLTVRKAGGESQVEYMIINLEEVLITSLSTGGSGSDDRLTENVTLNFAQVMVDYQPQKADGTKDGGPIKFGWNIRSNTKR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17587 162 6.41 -0.383 38.65
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.