Effector profile
PlantPEAD ID: PlantPEAD33191 Uniprot ID: A0A0W0H726 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1198305 Pathogen type: Bacteria
Species: Pseudomonas viridiflava Strain: ICMP 13104 Other name:
Gene name: NCBI Gene ID: LKEJ01000172
Entry name: A0A0W0H726_PSEVI Protein name: Hcp1 family type VI secretion system effector
DOI:
Gene/Protein information
Gene sequence:
ATGGCAGTCGATATCTTTATCAAGATCGGTGACATCAAGGGCGAGTCCATGGACAAGGCCCACAAGGAAGAGATCGATGTGTTGAACTGGAGCTGGGGCATGTCCCAGACCGGCAACATGCACACCGGTACAGGCGGTGGCGCAGGCAAGGTCAATATTCAGGATCTGTCGATTACCAAGTATGTCGACAAGTCCACTCCGAACCTGATGATGCATTGCTCCAGCGGCAAGCACATCGACAAGGTCAAGCTGACCGTGCGCAAGGCCGGCGGTGAAAATCAGGTCGAGTACCTGATCATCAATCTGGAAGAAGTGCTCATCACATCTCTGAGCACCGGCGGGTCGGGCAGCGATGATCGCCTGATCGAAAACGTCACCCTCAACTTTGCCCAGGTGCTGGTGGACTATCAGCCACAGAAAGCCGACGGCACCAAGGAAGGCGGCCCGGTCAAATACGGCTGGAACATCCGCTCCAACACCAAGCGCTGA
Protein sequence:
MAVDIFIKIGDIKGESMDKAHKEEIDVLNWSWGMSQTGNMHTGTGGGAGKVNIQDLSITKYVDKSTPNLMMHCSSGKHIDKVKLTVRKAGGENQVEYLIINLEEVLITSLSTGGSGSDDRLIENVTLNFAQVLVDYQPQKADGTKEGGPVKYGWNIRSNTKR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17712.1 162 6.42 -0.444 34.5
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.