Effector profile
PlantPEAD ID: PlantPEAD33192 Uniprot ID: A0A1M7QDV1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1190415 Pathogen type: Bacteria
Species: Pseudomonas asturiensis Strain: CC1524 Other name:
Gene name: Hcp NCBI Gene ID: FRDA01000023
Entry name: A0A1M7QDV1_9PSED Protein name: Type VI secretion system secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
ATGGCTGTCGATATCTTTATCAAGATCGGTGACATCAAGGGCGAGTCCATGGACAAGACCCACAAGGATGAAGTCGATGTATTGAACTGGAGCTGGGGCATGTCCCAGACCGGCAACATGCACACAGGCACAGGCGGTGGCGCGGGCAAGGTCAATATTCAGGACCTGTCGATCACCAAATACGTCGACAAATCCACCCCGAACCTGATGATGCACTGCTCCAGCGGCAAGCACATCGACAAGGTCAAGCTGACCGTGCGCAAAGCAGGCGGCGAAAATCAGGTCGAGTACCTGATCATCAACCTGGAAGAAGTGCTGATCACCTCCCTGAGCACCGGCGGCTCGGGCAGCGATGATCGCCTGATCGAAAACGTCACGCTGAACTTCGCCCAGGTCCTGGTCGACTACCAGCCTCAGAAAGCCGACGGCACCAAAGAAGGCGGCCCGGTCAAATACGGCTGGAACATCCGCTCCAACACCAAGCGCTGA
Protein sequence:
MAVDIFIKIGDIKGESMDKTHKDEVDVLNWSWGMSQTGNMHTGTGGGAGKVNIQDLSITKYVDKSTPNLMMHCSSGKHIDKVKLTVRKAGGENQVEYLIINLEEVLITSLSTGGSGSDDRLIENVTLNFAQVLVDYQPQKADGTKEGGPVKYGWNIRSNTKR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17714.1 162 6.41 -0.461 30.9
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.