Effector profile
PlantPEAD ID: PlantPEAD33208 Uniprot ID: A0A109HNX8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 343 Pathogen type: Bacteria
Species: Xanthomonas translucens Strain: B1 Other name:
Gene name: NCBI Gene ID: LNTA01000134
Entry name: A0A109HNX8_XANCT Protein name: Type VI secretion system secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
ATGGCTTATGACATGCATCTGAAGTTCGGTTCAGGCGACGTCGAGATCAAGGGCGCCTCCAACCACAGCAAGCACAAGGACGAGGTGCCGATCATTTCGTGGTCGTGGGGCGCCAGCAATACCGGCAACCTGCATACCGGCGCCGGCTACGCCGCAGGCGGCAAGGCCAACGTGCGCGACATTTCCATCACCAAGTACATCGACTCCTGCTCCAATGCGCTGCTCAACGCCTGCTGCACTGGTGCGCGCGTGCAGAACGCCACGCTGTACGTGACCAATGCCACCGGCGAGCAGACCGACTTCCTGACCATCGAGCTCAGCGAGGGGGTGATGATCACCTCGGTGTCCACCGGCGGCAGCGGTGGCGAGGATCGCTTGACCGAGAACATCACCCTGCACTTCGGCAAGTTCAAGTACGCGTTCCAGCCCCAGGACGACAAGGGCAAGAAGGAGGGCGGTACCAAGGACTTCACCTTCAACATGCAGGAAGTGAAGAAGTCCTGA
Protein sequence:
MAYDMHLKFGSGDVEIKGASNHSKHKDEVPIISWSWGASNTGNLHTGAGYAAGGKANVRDISITKYIDSCSNALLNACCTGARVQNATLYVTNATGEQTDFLTIELSEGVMITSVSTGGSGGEDRLTENITLHFGKFKYAFQPQDDKGKKEGGTKDFTFNMQEVKKS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17939 167 6.19 -0.466 30.4
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.