Effector profile
| PlantPEAD ID: PlantPEAD33213 | Uniprot ID: A0A1V9HR15 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1985254 | Pathogen type: Bacteria |
| Species: Xanthomonas phaseoli | Strain: pv. syngonii LMG 9055 | Other name: |
| Gene name: | NCBI Gene ID: JPUO02000006 | |
| Entry name: A0A1V9HR15_9XANT | Protein name: Hcp1 family type VI secretion system effector | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCGTTCGACATGCATATCAAGTTCGGCAGCGGCAAGGTCAAGATCGAAGGCGCGTCCAACTACAAGAAGCACAAGGGCGAGATTCCGATCCTGGCCTGGTCGTGGGGCGCGAGCAATTCCGGCGACCTGCACACCGGTGGCGGCTCGGCCAGCGGTGGCAAGGCGCATATCCAGGACATCTCCATCACCAAGTACGTGGACGGCTGCTCCAACGCGCTGCTGGATGCAGTGTGCACCGGTGCACGGGTGGAAAACGCCTGGCTGTACGTCACCAACGCCACCGGCGAGCAAAGCGACTTTCTCACCCTGGAATTGAGCGAAGGCGTGCTGATTACCTCGCTGTCGACCGGCGGCTCCGGTGGCGAAGACCGCCTGACCGAAAACGTGACGCTGCACTTCGGCAAGTTCAAGTACGGCTTCCAGCAGCAGGACGACAAGGGTGCCGCCCAGGGCGGGGCGAAGGAATTCACCTACGACATCCAGGGTGTGGCCAAGGCATAA
Protein sequence:
MAFDMHIKFGSGKVKIEGASNYKKHKGEIPILAWSWGASNSGDLHTGGGSASGGKAHIQDISITKYVDGCSNALLDAVCTGARVENAWLYVTNATGEQSDFLTLELSEGVLITSLSTGGSGGEDRLTENVTLHFGKFKYGFQQQDDKGAAQGGAKEFTYDIQGVAKA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17611.6 | 167 | 5.68 | -0.302 | 28.69 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: