Effector profile
PlantPEAD ID: PlantPEAD33214 Uniprot ID: A0A2S4JF18 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 339 Pathogen type: Bacteria
Species: Xanthomonas campestris Strain: LMCP11 Other name:
Gene name: NCBI Gene ID: PRDO01000003
Entry name: A0A2S4JF18_XANCA Protein name: Hcp1 family type VI secretion system effector
DOI:
Gene/Protein information
Gene sequence:
ATGGCGTTCGACATGCACATCAAGTTTGGCAGCGGCAAGGTCAAGATCGAAGGCGCATCCAACCACAAGAAGCACAAGGGCGAGATCCCGATCCTGGCGTGGTCGTGGGGCGCGAGCAATTCCGGCGACCTGCACACCGGCGGCGGCTCGGCCAGCGGCGGCAAGGCGCATATCCAGGACATTTCCATCACCAAGTATGTCGACGGTTGTTCGAATGCACTGCTGGATGCGGTGTGCACCGGCGCGCGCGTGGATGGCGCCTGGTTGTATGTGACCAATGCCACCGGCGAGCAGAGCGACTTTCTCACCATCGAGTTGAGCGAAGGCGTACTGATCACCTCGCTGTCCACCGGCGGTTCCGGTGGCGAAGATCGCCTGACCGAAAACGTGACGCTGCATTTCGGCAAGTTCAAGTATGGCTTCCAGCCGCAGGACGACAAGGGCATCGCGCAGGGCGGCGCGAAGGAATTCACCTACGACATCCAGGGTGTTGCGAAGGCGTAA
Protein sequence:
MAFDMHIKFGSGKVKIEGASNHKKHKGEIPILAWSWGASNSGDLHTGGGSASGGKAHIQDISITKYVDGCSNALLDAVCTGARVDGAWLYVTNATGEQSDFLTIELSEGVLITSLSTGGSGGEDRLTENVTLHFGKFKYGFQPQDDKGIAQGGAKEFTYDIQGVAKA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17525.5 167 5.82 -0.263 31.33
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.