Effector profile
| PlantPEAD ID: PlantPEAD33225 | Uniprot ID: A0A9Q9J3Q7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 2053930 | Pathogen type: Bacteria |
| Species: Xanthomonas prunicola | Strain: CIX249 | Other name: |
| Gene name: | NCBI Gene ID: CP096142 | |
| Entry name: A0A9Q9J3Q7_9XANT | Protein name: Type VI secretion system tube protein Hcp | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCTTTCGATATGCATCTCAAATTCGGCTCGGGCGACGTCGAGATCAAGGGCGCATCCAACCATTCCAAGCACAAGGACGAAGTGCCGATCATTGCCTGGTCGTGGGGCGCCAGCAACACCGGCAACCTGCACACCGGCGCCGGGTATGCGGCCGGCGGCAAGGCGAATGTGCAGGATATTTCCATCACCAAGTACATCGATAGTTGCTCCAACGCCTTGCTCAATGCCTGTTGCACGGGCGCACGTGTGGATTCGGCCACGCTGTACGTCACCAACGCCACCGGCGAGCAGTCCGATTACGTGACGATCGAGCTCAGCGAAGGCGTCATGATCACCTCGGTGTCCACCGGCGGCAGTGGTGGCGAAGACCGTCTGACCGAAAACGTGACCTTGCATTTCGGCAAGTTCAAGTATTCGTTCCAGCCGCAGGACGACAAGGGCAAGAAGCAGGGCGGCACCAAGGACTTCACGTTCAACATGCAGGAAGTGAAGAAGTCCTGA
Protein sequence:
MAFDMHLKFGSGDVEIKGASNHSKHKDEVPIIAWSWGASNTGNLHTGAGYAAGGKANVQDISITKYIDSCSNALLNACCTGARVDSATLYVTNATGEQSDYVTIELSEGVMITSVSTGGSGGEDRLTENVTLHFGKFKYSFQPQDDKGKKQGGTKDFTFNMQEVKKS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17827.8 | 167 | 5.92 | -0.444 | 30.56 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: