Effector profile
PlantPEAD ID: PlantPEAD33235 Uniprot ID: A0A1H6P2S8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 50340 Pathogen type: Bacteria
Species: Pseudomonas fuscovaginae Strain: LMG 2158 Other name:
Gene name: NCBI Gene ID: LT629972
Entry name: A0A1H6P2S8_9PSED Protein name: Type VI secretion system secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
ATGGCAATTCCGATTTACCTATGGCTGCAAGATGACGGTGGTGCCCAGATCAAGGGGTCGGTCGATGTACAGGGTCGTGAAGGCAGTATCGAGGTGATTGCCCAAGACCATGCCATCCAGATACCCACCGACAACAACACCGGAAAACTGACGGGGGCTCGGGTTCACACACCTTTCCTTTTCTCCAAGGAAATCGATTCGTCCAGTCCTTACTTCTACAAGGCCGTCAGCACCGGGCAGACCCTGAAGGGGGCTGAGTTCAAATGGTACCGGATCAATGATGCGGGCCAGGAAGTGGTGTACTTCACCACCAAGCTGGAGAACGTCAAGGTGGTCAAGGTCGCACCGAAAATGCACGACGTGAAGGACGCGGGCAAGGAAAAGCACAGCCATCTCGAAGCTATCGAGCTGCGCTACGAGAAGATCACCTGGACCTACGTGGACGGCAACATCATCCATTCGGATTCCTGGAGTGAGCGTCAGAGCGCCTGA
Protein sequence:
MAIPIYLWLQDDGGAQIKGSVDVQGREGSIEVIAQDHAIQIPTDNNTGKLTGARVHTPFLFSKEIDSSSPYFYKAVSTGQTLKGAEFKWYRINDAGQEVVYFTTKLENVKVVKVAPKMHDVKDAGKEKHSHLEAIELRYEKITWTYVDGNIIHSDSWSERQSA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
18327.6 163 6.06 -0.479 34.5
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.