Effector profile
| PlantPEAD ID: PlantPEAD33238 | Uniprot ID: A0A212BC51 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 286 | Pathogen type: Bacteria |
| Species: Pseudomonas | Strain: sp. A46 | Other name: |
| Gene name: | NCBI Gene ID: NBMS01000044 | |
| Entry name: A0A212BC51_9PSED | Protein name: Hcp family T6SS protein CtsH1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGCAATTCCCGTATACCTCTGGCTGCAAGACGATGGTGGCGCAGACATCAAGGGTTCGGTGGACGTGCAGAAACGCGAGGGCAGCATCGAGGTCGTCGCCCAGGATCACAGTCTCTACATCCCGACCGACAACAACACCGGCAAGCTGACTGGAACCCGGGTGCACACTCCCTTCCTCTTCACCAAGGAAATCGATGCGTCCAGTCCCTACCTGTACAAGGCCGTGACCACCGGTCAGACCCTCAAGAGCGCCGAGTTCAAGTGGTATCGCATCGACGACGCCGGCCAGGAAGTCGAGTACTTCAACACCAAGCTGGAGAACGTCAAGGTCGTCAAGGTCGCGCCGAAGATGCATGACGTGAAGGACCCGGCCAAGGAGAAGCACAACCACCTGGAACAGGTCGAGCTGCGCTACGAGAAGATCACCTGGACCTACAAGGACGGGAACATCATCCACTCCGATTCCTGGAACGAGCGTCAGAGCGCCTGA
Protein sequence:
MAIPVYLWLQDDGGADIKGSVDVQKREGSIEVVAQDHSLYIPTDNNTGKLTGTRVHTPFLFTKEIDASSPYLYKAVTTGQTLKSAEFKWYRIDDAGQEVEYFNTKLENVKVVKVAPKMHDVKDPAKEKHNHLEQVELRYEKITWTYKDGNIIHSDSWNERQSA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18656.9 | 163 | 5.86 | -0.694 | 34.47 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: