Effector profile
PlantPEAD ID: PlantPEAD33239 Uniprot ID: A0A246F863 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 46680 Pathogen type: Bacteria
Species: Pseudomonas nitroreducens Strain: DF05 Other name:
Gene name: NCBI Gene ID: NJBA01000005
Entry name: A0A246F863_PSENT Protein name: Hcp1 family type VI secretion system effector
DOI:
Gene/Protein information
Gene sequence:
ATGGCAATTCCCGTTTACCTGTGGCTGAAAGACGACGGCGGCGCGGACATCAAGGGTTCGGTCAACGTCCAGAGCCGCGAAGGCAGTGTCGAAGTCGTGGCCCAGGATCACAGCCTGTACATCCCCACCGACAACAACACCGGCAAGCTCACCGGCACCCGCATCCACACACCGTTCAAGTTCACCAAGGAAATCGATGCGTCCAGCCCGTATTTCTACAAGGCAGTGAGCTCCGGCCAGACCCTCAAGAGCGCCGAGTTCAAGTGGTACCGCATCGATGACGCCGGTCAGGAGGTCGAGTACTTCAACACCCTTCTGGAGAACGTCAAGGTCGTGAAAGTCGCGCCGAAAATGCACGACATCAAGGATCCCTCCAAGGAGAAGCACAACCACCTCGAAGAGGTGGAACTGCGCTACGAGAAGATCACCTGGACCTACAAGGACGGCAACATCATCCACGCCGACGCCTGGAACGAGCGCCAGACCGCCTGA
Protein sequence:
MAIPVYLWLKDDGGADIKGSVNVQSREGSVEVVAQDHSLYIPTDNNTGKLTGTRIHTPFKFTKEIDASSPYFYKAVSSGQTLKSAEFKWYRIDDAGQEVEYFNTLLENVKVVKVAPKMHDIKDPSKEKHNHLEEVELRYEKITWTYKDGNIIHADAWNERQTA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
18633.9 163 5.86 -0.666 31.99
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.