Effector profile
PlantPEAD ID: PlantPEAD33244 Uniprot ID: A0A2K9C948 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. S09G 359 Other name:
Gene name: NCBI Gene ID: CP025263
Entry name: A0A2K9C948_9PSED Protein name: Type VI secretion system tube protein Hcp
DOI:
Gene/Protein information
Gene sequence:
ATGGCAATTCCCGTTTACCTCTGGCTGCAAGACGACGGTGGCGCAAACATCAAAGGCTCGGTGGACGTGCAAAAGCGCGAAGGCAGCATCGAGGTGATTGCCCAGGACCACAGCCTGTACATCCCTACCGACAACAACACCGGCAAATTGACCGGTACGCGGGTACACACCCCGTTTCTGTTTTCCAAGGAAATCGATGCGTCCAGCCCTTACCTTTACAAGGCCGTGACCACCGGGCAGACCCTCAAGAGTGCCGAGTTCAAGTGGTTTCGCATCGATGATGCGGGGCAGGAAGTCGAGTACTTCAACACCAAGCTGGAGAACGTCAAGGTGGTGAAAGTCGCGCCAAAAATGCACGACGTCAAAGACCCTGGCAAAGAGAAGCACAACCACCTGGAACAGATCGAGCTGCGCTACGAGAAGGTCACCTGGACCTACAAGGACGGCAACATCATCCACTCCGATTCGTGGAATGAACGCCAGAGCGCCTGA
Protein sequence:
MAIPVYLWLQDDGGANIKGSVDVQKREGSIEVIAQDHSLYIPTDNNTGKLTGTRVHTPFLFSKEIDASSPYLYKAVTTGQTLKSAEFKWFRIDDAGQEVEYFNTKLENVKVVKVAPKMHDVKDPGKEKHNHLEQIELRYEKVTWTYKDGNIIHSDSWNERQSA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
18625.9 163 6.07 -0.681 39.66
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.