Effector profile
| PlantPEAD ID: PlantPEAD33246 | Uniprot ID: A0A2M8V123 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 306 | Pathogen type: Bacteria |
| Species: Pseudomonas | Strain: EaCA-3 | Other name: |
| Gene name: | NCBI Gene ID: PEKX01000004 | |
| Entry name: A0A2M8V123_PSESP | Protein name: Type VI secretion system tube protein Hcp | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAAGCGGTCTGGCGTTCGTTCCAGGCATCGGCATGGATGATGTTGCCGTCCTTGTAGGTCCAGGTGATCTTTTCGTAACGCAGTTCGATCTCTTCCAGGTGGTTGTGCTTCTCTTTGCCCGGGTCTTTGACGTCGTGCATCTTGGGCGCCACTTTCACGACCTTGACGTTCTCCAGCAGGGTGTTGAAGTACTCGACTTCCTGCCCGGCGTCGTCGATGCGGTACCACTTGAACTCGGCGCTCTTGAAGGTCTGACCGGAGCTCACCGCCTTGTAGAGGTAAGGGCTGGCGGCATCGATTTCCTTGGTGAACTTGAACGGCGTATGGATGCGGGTGCCGGTCAGCTTGCCGGTGTTGTTGTCGGTAGGGATGTACAGGCTGTGGTCCTGGGCTACGACCTCGACACTGCCTTCACGGCTCTGAACGTTGACGGACCCTTTGATGTCCGCACCGCCGTCGTCTTTCAGCCACAGGTAAACGGGAATTGCCAT
Protein sequence:
MAIPVYLWLKDDGGADIKGSVNVQSREGSVEVVAQDHSLYIPTDNNTGKLTGTRIHTPFKFTKEIDAASPYLYKAVSSGQTFKSAEFKWYRIDDAGQEVEYFNTLLENVKVVKVAPKMHDVKDPGKEKHNHLEEIELRYEKITWTYKDGNIIHADAWNERQTA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18587.9 | 163 | 5.86 | -0.648 | 31.68 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: