Effector profile
PlantPEAD ID: PlantPEAD33247 Uniprot ID: A0A2N1DZF0 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 294 Pathogen type: Bacteria
Species: Pseudomonas fluorescens Strain: PfR 37 Other name:
Gene name: NCBI Gene ID: NVXX01000036
Entry name: A0A2N1DZF0_PSEFL Protein name: Type VI secretion system tube protein Hcp
DOI:
Gene/Protein information
Gene sequence:
ATGGCAATTCCCGTTTACCTCTGGCTGCAAGACGACGGCGGCGCAAGCATCAAAGGTTCGGTGGACGTGCAAAAGCGCGAAGGCAGCATCGAAGTGGTTGCCCAGGACCACAGCCTGTACATCCCCACCGACAACAACACCGGCAAGTTGACCGGGACGCGCGTACACACCCCGTTTCTGTTTTCCAAGGAAATCGATTCGTCCAGCCCTTACCTTTACAAGGCGGTGACCACCGGGCAAACCCTCAAGAGTGCTGAGTTCAAGTGGTATCGCATCGACGACGCCGGGGAGGAAGTCGAGTATTTCATCACCAAACTGGAAAACGTCAAGGTGGTGAAAGTCGCGCCGAAAATGCACGACGTCAAAGACCCAGCCAAAGAGAAGCACAACCACCTGGAGCAGGTCGAGTTGCGTTACGAGAAGGTCACCTGGACCTACAAGGACGGCAACATCATCCACTCCGATTCGTGGAACGAACGCCAAAGCGCGTGA
Protein sequence:
MAIPVYLWLQDDGGASIKGSVDVQKREGSIEVVAQDHSLYIPTDNNTGKLTGTRVHTPFLFSKEIDSSSPYLYKAVTTGQTLKSAEFKWYRIDDAGEEVEYFITKLENVKVVKVAPKMHDVKDPAKEKHNHLEQVELRYEKVTWTYKDGNIIHSDSWNERQSA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
18616.9 163 5.86 -0.647 37.71
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.