Effector profile
| PlantPEAD ID: PlantPEAD33266 | Uniprot ID: A0A855MBV1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 2488639 | Pathogen type: Bacteria |
| Species: Pectobacterium versatile | Strain: F131 | Other name: |
| Gene name: | NCBI Gene ID: PDVW01000025 | |
| Entry name: A0A855MBV1_9GAMM | Protein name: Hcp family type VI secretion system effector | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCAACTCCATGCTATATCAGCATCGAAGGTAAAACTCAGGGCAACATCACTGCAGGTGCTTTCACTTCTGATTCTGTCGGCAACATCTATGTGGAAGGCCACGAAGACGAAATGCTGGTACAGGAATTCAAACACATCGTCACCGTACCGACCGATCCGCAGTCTGGTCAGCCGTCCGGTCAGCGTGTACACAAGCCGTTCAAATTCACCGTCGCGCTGAACAAAGCGGTTCCGCTGATGTACAACTCTCTGGCATCTGGCGAAATGCTGCCGACCGTAACGCTGAAGTGGTATCGCACATCAGTTGAAGGGAAACAGGAGCACTTCTTCTCTACCGTGCTGACCGATGCCACCATCGTGGATATCGACTGCAAAATGCCACACTGTCAGGATCCGTCAAAACTGGACTACACCCAGCTGATCGAAGTGTCACTGGCCTACCGCAAAATCGATTGGGAGCACACCGTTGCTGGGACTTCCGGTTCCGATGACTGGCGTGCACCGGTCGAAGCGTAA
Protein sequence:
MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVEGHEDEMLVQEFKHIVTVPTDPQSGQPSGQRVHKPFKFTVALNKAVPLMYNSLASGEMLPTVTLKWYRTSVEGKQEHFFSTVLTDATIVDIDCKMPHCQDPSKLDYTQLIEVSLAYRKIDWEHTVAGTSGSDDWRAPVEA
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19094.6 | 172 | 5.13 | -0.326 | 38.04 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: