Effector profile
| PlantPEAD ID: PlantPEAD33271 | Uniprot ID: A0A0H3I6K8 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1905730 | Pathogen type: Bacteria |
| Species: Pectobacterium parmentieri | Strain: SCC3193 | Other name: |
| Gene name: | NCBI Gene ID: CP003415 | |
| Entry name: A0A0H3I6K8_PECPM | Protein name: Hcp protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCAACTCCATGCTATATCAGCATCGAAGGTAAAACACAGGGCAACATCACCGCAGGGGCTTTCACCTCTGATTCTGTCGGCAACATCTACGTGGAAGGCCACGAAGACGAAATGCTGGTGCAGGAATTCAAGCACATCGTCACCGTACCAACCGACCCGCAGTCCGGTCAGCCATCCGGTCAGCGTGTCCACAAACCGTTCAAGTTCACCGTCGCGCTGAACAAAGCGGTACCGCTGATGTACAACGCCCTCGCCTCCGGCGAAATGCTGCCAACCGTCACCCTGAAGTGGTATCGCACCTCAGTGGAAGGCAAACAGGAGCACTTCTTCTCTACCGTGCTGACCGATGCCACCATCGTTGACGTTAACTGCCAGATGCCACACTGCCAGGACCCGGCCAAGCTGGACTACACCCAACTGATTGAAGTCTCGCTGGCCTACCGCAAAATCGACTGGGAGCACACCGTCGCCGGCACCTCTGGCTCCGACGACTGGCGCGCGCCGGTCGAAGCCTAA
Protein sequence:
MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVEGHEDEMLVQEFKHVVTVPTDPQSGQPSGQRVHKPFKFTVALNKAVPLMYNALASGEMLPTVTLKWYRTSVEGKQEHFFSTVLTDATIVDINCQMPHCQDPSKLDYTQLIEVSLAYRKVDWEHTVAGTSGSDDWRTPVEA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19079.5 | 172 | 5.12 | -0.326 | 31.48 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG: pec:W5S_1467,ppar:A8F97_05145
PRINTS: