Effector profile
| PlantPEAD ID: PlantPEAD33275 | Uniprot ID: A0A0P9Y2U4 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 29438 | Pathogen type: Bacteria |
| Species: Pseudomonas savastanoi | Strain: pv. retacarpa strain ICMP16945 | Other name: |
| Gene name: | NCBI Gene ID: LJRD01000454 | |
| Entry name: A0A0P9Y2U4_PSESS | Protein name: Hemolysin co-regulated protein 1A | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCCTACACCCGCCTATATGACTGTCATAGACGCCAATCAAAAAACGCTGACAGCAGGAGCTTTCACAGCAGACTCTGTCGGTAACGTCTATCAGGAAGGCCATGAAGATGAAGCGATCATCCAGGCATTCAGCCATAACATTATTACACCCTGTGATACGCAGTCAGGTCAGCCTACTGGCCAACGCATTCATGGGCCTGCCTGTGTCACAAAAATTTTCGACAAAACCTCGCCATTGCTTCTGGAGGCCCTTTGCTCAGGCTCAACACTGAGCAAAGTCGAAATCAAGTGGTACCGGACGTCTATCGATGGCAAGCAGGAACACTATTACACCACCACCCTTGAGGATGCGGTCATCGTCAACATCAAGTCCTATATGCACAACTGCCAGGATCCGAAGAACTCACACTTTGGACACCTGGAGGACGTTCAATTCAGCTATCGCAAAATAACCTGGGATCACGTAAAGGCCACTACTACCGGATCTGATGACTGGAGAAGCCCAAAGTCGGCATAA
Protein sequence:
MPTPAYMTVIDANQKTLTAGAFTADSVGNVYQEGHEDEAIIQAFSHNIITPCDTQSGQPTGQRIHGPACVTKIFDKTSPLLLEALCSGSTLSKVEIKWYRTSIDGKQEHYYTTTLEDAVIVNIKSYMHNCQDPKNSHFGHLEDVQFSYRKITWDHVKATTTGSDDWRSPKSA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 19140.3 | 172 | 5.85 | -0.515 | 44.27 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: