Effector profile
PlantPEAD ID: PlantPEAD33277 Uniprot ID: A0A0H2ZBE0 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 287 Pathogen type: Bacteria
Species: Pseudomonas aeruginosa Strain: strain UCBPP-PA14 Other name:
Gene name: NCBI Gene ID: CP000438
Entry name: A0A0H2ZBE0_PSEAB Protein name: Type VI secretion system tube protein Hcp
DOI:
Gene/Protein information
Gene sequence:
TCACTTGACCAACTGGTTGGCGGCCAGGTCCCAGGTCGAGGCGGCCGTGCCTTCCTTGGTGCCGTCGTCCTTCTGCGCGGTCAGCTCCCACTTGATCTTGGTGAAGTTCAGCGACAGGGTCTCCACCGGCTTGCCGCCGGCGCCGCCGCTGACGCTGACGTTGGAGAGCACCACGTTGTTCAGGGTGTAGACGATGAAGGGCATGATCTGCCCGTTGCCCTCGGCGGCGTTGCGGCCGATGGTGATGGTCGCCTCGGCGATCGGCTTGCCGGCGCAGCAGTATTCGTTGAGGGTCGGGGTCGAGGTGTCGATGAACTTGGTGAGGGTGAATTCGCCGACGTGGGGTTTGCCGGAGGTGCGCTCCGAGTTGCTGACGTCGTTGGTGACCTGCATCGCCACGTTGTGGCTGTAGGACATGATTTCGATCTTGTTTTCGTAGCCGACGAGCAGGCTGTCGCCTTTGATGTCGCTGCCGAAATCGAGAATGATCGCATCCAT
Protein sequence:
MDAIILDFGSDIKGDSLLVGYENKIEIMSYSHNVAMQVTNDVSNSERTSGKPHVGEFTLTKFIDTSTPTLNEYCCAGKPIAEATITIGRNAAEGNGQIMPFIVYTLNNVVLSNVSVSGGAGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDLAANQLVK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17635.9 165 4.85 -0.142 11.49
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.