Effector profile
PlantPEAD ID: PlantPEAD33278 Uniprot ID: A0A0J6KAH9 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 163011 Pathogen type: Bacteria
Species: Pseudomonas lini Strain: BS3782 Other name:
Gene name: NCBI Gene ID: VZPO01000006
Entry name: A0A0J6KAH9_9PSED Protein name: Type VI secretion system secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
ATGGATGCAATCATTCTCGACCTCGGCGGCGACATCAAAGGCGATAGCCTGCTCGAGGGTTACAAGGACAAGATCGAAGTCATGTCCTACAGCCACAACGTGGCCATGCAGGTGACCAACGACGTCAGCAACTCGGAGCGGACCTCCGGCAAGCCGCACATCGGCGAGTTCACCCTGACCAAATTCGTCGACAGTTCGACGCCATCCCTCAACGAATATTGCTGCGCCGGCAAACCGATCCCCGAAGCCAAAATCACCATCGGCCGTAACGCCGCCGAAGGCAGCGGTCAGCTGATGCCATTCATCATCTACACCCTGACCAATGTCGTGCTGTCCAACGTCAGCGTCAGTGGCGGTACCGGTGGCAAACCGGTGGAAACCCTGTCGCTGAACTTCACCAAAATCAAATGGGAACTCACCGCACAGAAAGACGACGGCACCAAGGAAGGCACGGCCGCCTCGACCTGGGACATGGCCGCCAACAAACTCATCAAAGCCAAGTAA
Protein sequence:
MDAIILDLGGDIKGDSLLEGYKDKIEVMSYSHNVAMQVTNDVSNSERTSGKPHIGEFTLTKFVDSSTPSLNEYCCAGKPIPEAKITIGRNAAEGSGQLMPFIIYTLTNVVLSNVSVSGGTGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDMAANKLIKAK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17848.3 167 5.4 -0.232 20.22
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.