Effector profile
| PlantPEAD ID: PlantPEAD33279 | Uniprot ID: A0A0K8LVH9 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. actinidiae strain MAFF212054 | Other name: |
| Gene name: | NCBI Gene ID: BGJZ01000130 | |
| Entry name: A0A0K8LVH9_PSESF | Protein name: Type VI protein secretion system component Hcp | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAACTGGCTTTCTTGTTGGCGGCCATGTCCCAGCTGGTGCCGGCCACGCCTTCCTTGGTGCCGTCGTCTTTCTGGGCGGTCAGCTCCCATTTGATCTTGGTGAAGTTCAGCGACAGGGTTTCGACCGGTTTGCCACCGGTACCGCCACTGACACTGACGTTTGACAGCACCACGTTATCCAGCGTGTAGGTGATGAACGCCATCAGTTGGCCGCTGCCCTCTGCCGCGTTACGCCCGATGACAATGGTCGCTTTCGGAATCGGCTTGCCGGCGCAGCAATAGCTGTTGAGGGTCGGGGTGGAGCTGTCGACGAACTTGGTCAGGGTGAACTCGCCGATGTGTGGCTTGCCCGAAGTCCGCTCGGAGTTGCTGACATCGTTTGTAACCTGCATGGCCACGTTGTGGCTGTAGGACATGATTTCGATCTTGTCCTTGTAACCTTCCAGCAAACTGTCGCCTTTGATCTCGTCGCCCAGATCGAGAATGATCGCATCCAT
Protein sequence:
MDAIILDLGDEIKGDSLLEGYKDKIEIMSYSHNVAMQVTNDVSNSERTSGKPHIGEFTLTKFVDSSTPTLNSYCCAGKPIPKATIVIGRNAAEGSGQLMAFITYTLDNVVLSNVSVSGGTGGKPVETLSLNFTKIKWELTAQKDDGTKEGVAGTSWDMAANKKAS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17568.8 | 165 | 5.16 | -0.231 | 19.48 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: