Effector profile
PlantPEAD ID: PlantPEAD33287 Uniprot ID: A0A166Q3R7 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 294 Pathogen type: Bacteria
Species: Pseudomonas fluorescens Strain: FW300-N1B4 Other name:
Gene name: NCBI Gene ID: LUKJ01000003
Entry name: A0A166Q3R7_PSEFL Protein name: Type VI secretion effector protein (Hcp)
DOI:
Gene/Protein information
Gene sequence:
TTACTTGACGAGCTTGTTGGCGGCCATGTCCCAGGTCGAGGCGGCCGTGCCTTCCTTGGTGCCGTCGTCTTTCTGTGCGGTGAGTTCCCACTTGATCTTGGTGAAGTTCAGCGACAGGGTTTCCACCGGTTTACCACCTGTGCCACCGCTGACGCTGACGTTGGACAGCACCACGTTAGTCAGGGTGTAGATGATGAATGGCATCAGTTGACCGCTGCCTTCGGCGGCGTTGCGGCCGATGGTGATTTTGGCTTCCGGGATTGGTTTGCCGGCGCAGCAATACTCGTTGAGAGAGGGCGTCGAGCTGTCGACGAATTTGGTCAGGGTGAACTCGCCGATGTGCGGCTTGCCGGAGGTACGCTCCGAGTTGCTGACGTCGTTGGTCACCTGCATCGCCACGTTGTGGCTGTAGGACATGACTTCGATCTTGTCCTTGTAACCCTCGAGCAGGCTATCGCCTTTGATGTCGCCGCCGAGGTCGAGAATGATTGCATCCAT
Protein sequence:
MDAIILDLGGDIKGDSLLEGYKDKIEVMSYSHNVAMQVTNDVSNSERTSGKPHIGEFTLTKFVDSSTPSLNEYCCAGKPIPEAKITIGRNAAEGSGQLMPFIIYTLTNVVLSNVSVSGGTGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDMAANKLVK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17635 165 5.18 -0.224 20.69
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.