Effector profile
PlantPEAD ID: PlantPEAD33291 Uniprot ID: A0A1G5VQI2 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 286 Pathogen type: Bacteria
Species: Pseudomonas Strain: sp. NFACC15-1 Other name:
Gene name: NCBI Gene ID: FMXJ01000002
Entry name: A0A1G5VQI2_9PSED Protein name: Type VI secretion system secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
TTACTTGGTCATTTTGTTGGCGGCCAGGTCCCAGGTCGTGCCCGCCGTGCCTTCCTTGGTGCCGTCGTCTTTCTGCGCGGTGAGCTCCCATTTGATCTTGGTGAAGTTCAGCGACAGGGTTTCCACCGGTTTGCCGCCGGTGCCGCCGCTGACACTGACGTTGGACAGCACGACGTTGGTCAGGGTGTAGATGATGAAGGGCATGAGTTTACCGCTGCCTTCGGCGGCGTTGCGGCCGATGGTGATGACGGCTTGCGGGATTGGCTTGCCGGCGCAGCAATACTCATTGAGGGAGGGGGTGGAGCTGTCGACGAATTTGGTCAGGGTGAATTCGCCGATGTGGGGCCGGCCGGAGGTACGCTCCGAGTTGCTGACGTCGTTGGTGACCTGCATTGCCACGTTATGGCTGTAGGACATGACCTCGATCTTGTCCGTGAACCCCTCCAGCAGGCTGTCGCCCTTGATGTCGCCGCCGAGGTCGAGAATGATTGCATCCAT
Protein sequence:
MDAIILDLGGDIKGDSLLEGFTDKIEVMSYSHNVAMQVTNDVSNSERTSGRPHIGEFTLTKFVDSSTPSLNEYCCAGKPIPQAVITIGRNAAEGSGKLMPFIIYTLTNVVLSNVSVSGGTGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAGTTWDLAANKMTK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17591.9 165 5.15 -0.179 24.17
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.