Effector profile
PlantPEAD ID: PlantPEAD33294 Uniprot ID: A0A1H2LCG1 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1274359 Pathogen type: Bacteria
Species: Pseudomonas sihuiensis Strain: KCTC 32246 Other name:
Gene name: NCBI Gene ID: LT629797
Entry name: A0A1H2LCG1_9PSED Protein name: Type VI secretion system secreted protein Hcp
DOI:
Gene/Protein information
Gene sequence:
TTAGCTGGACTTGACGAGCTTGTTGGCTGCCAGGTCCCAGGTGGAGGCGGCGGTGCCTTCCTTGGTGCCATCGTCCTTCTGCGCGGTGAGCTCCCATTTAATCTTGGTAAAGTTCAGCGACAGGGTTTCCACCGGCTTACCGCCGGCACCACCACTGACGCTGACGTTGGAGAGCACCACGTTATCGAGGGTGTAGATGATGAACGGCAACAACTTGCCATCGCCTTCGGCGGCGTTGCGGCCGATGGTGATCTTGGCTGTGGTGATGGGTTTGCCGGCACAGCAGTATTCGTTGAGCGAGGGAGTGGCGGTATCGACGAACTTGGTGACGGTGAACTCGCCGATGTGCGGCTTGCCGGAGGTGCGCTCCGAGTTGCTGACATCGTTGGTGACCTGCATTGCCACATTGTGGCTGTAGGACATCAACTCGATCTTGTCGGTGTAGCCCTCGAGCAGGCTGTCGCCTTTGATGTCGTCGCCGAGGTCGAGAATGATGGCATCCAT
Protein sequence:
MDAIILDLGDDIKGDSLLEGYTDKIELMSYSHNVAMQVTNDVSNSERTSGKPHIGEFTVTKFVDTATPSLNEYCCAGKPITTAKITIGRNAAEGDGKLLPFIIYTLDNVVLSNVSVSGGAGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDLAANKLVKSS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17790.1 167 4.88 -0.189 14.06
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.