Effector profile
PlantPEAD ID: PlantPEAD33299 Uniprot ID: A0A246F908 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 46680 Pathogen type: Bacteria
Species: Pseudomonas nitroreducens Strain: DF05 Other name:
Gene name: NCBI Gene ID: NJBA01000005
Entry name: A0A246F908_PSENT Protein name: Type VI secretion effector protein (Hcp)
DOI:
Gene/Protein information
Gene sequence:
ATGGACGCGATACTTCTCGACCTGGGCGACGACATCAAGGGCGACAGCCTGCTGGCCGGCTTCGAAAACAAGATCGAAATCATGTCGTACAGCCACAACGTCGCCATGCAGGTGACCAACGATGTCAGCAACTCGGAGCGCACCTCCGGCAAGCCGCACATCGGCGAATTCACCCTGACCAAGTTCGTCGACACCTCGACGCCGACGCTCAACGAATACTGCTGCTCCGGCAAGGCCATCCCTTCCGCGACCCTGACCATCGGCCGCAACGCCGCCGAGGGCGACGGCAAAATCATGCCGTTCATTACCTACACCCTGGACAACGTCGTGCTGTCGAACGTCAGCGTCAGCGGCGGCGCCGGTGGCAAGCCGGTGGAAACCCTGTCGCTGAACTTCACCAAGATCAAATGGGAGCTCACTGCGCAGAAGGACGACGGCAGCAAGGAAGGCACCGCCGCGTCAACCTGGGACCTGGCCGCCAACAAGCTGGCCAGCTAA
Protein sequence:
MDAILLDLGDDIKGDSLLAGFENKIEIMSYSHNVAMQVTNDVSNSERTSGKPHIGEFTLTKFVDTSTPTLNEYCCSGKAIPSATLTIGRNAAEGDGKIMPFITYTLDNVVLSNVSVSGGAGGKPVETLSLNFTKIKWELTAQKDDGSKEGTAASTWDLAANKLAS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17480.6 165 4.74 -0.181 20.58
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.