Effector profile
PlantPEAD ID: PlantPEAD33306 Uniprot ID: A0A2M8USP4 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 306 Pathogen type: Bacteria
Species: Pseudomonas Strain: EaCA-3 Other name:
Gene name: NCBI Gene ID: PEKX01000016
Entry name: A0A2M8USP4_PSESP Protein name: Type VI secretion system tube protein Hcp
DOI:
Gene/Protein information
Gene sequence:
TTAGCTGGCGAGCTTGTTGGCGGCCAGGTCCCAGGTCGAGGCGGCGGTGCCCTCCTTGCTGCCGTCGTCTTTCTGCGCGGTGAGCTCCCATTTGATCTTGGTGAAGTTCAGCGACAGGGTTTCCACCGGCTTGCCACCGGCGCCACCGCTGACGCTGACGTTGGAGAGCACCACGTTGTTCAGGGTGTAGGTGATGAAGGGCATGATCTTGCCGTCGCCCTCGGCGGCGTTGCGGCCGATGGTGACCGTGGCGGTGGGGATGGCCTTGCCGGCGCAGCAGTATTCGTTGAGCGTCGGGGTGGAGGTGTCGACGAACTTGGTCAGGGTGAACTCGCCGATGTGTGGCTTGCCGGAGGTGCGCTCCGAGTTGCTGACATCGTTGGTCACCTGCATGGCGACGTTGTGGCTGTACGACATGATTTCGATCTTGTTTTCGTAGCCGGACAGCAGGCTGTCGCCCTTGATGTCGTCGCCCAGGTCGAGAAGTATTGCATCCAT
Protein sequence:
MDAILLDLGDDIKGDSLLSGYENKIEIMSYSHNVAMQVTNDVSNSERTSGKPHIGEFTLTKFVDTSTPTLNEYCCAGKAIPTATVTIGRNAAEGDGKIMPFITYTLNNVVLSNVSVSGGAGGKPVETLSLNFTKIKWELTAQKDDGSKEGTAASTWDLAANKLAS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17495.6 165 4.85 -0.202 17.93
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.