Effector profile
| PlantPEAD ID: PlantPEAD33310 | Uniprot ID: J2LPB5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 963 | Pathogen type: Bacteria |
| Species: Herbaspirillum | Strain: sp. CF444 | Other name: |
| Gene name: | NCBI Gene ID: AKJW01000011 | |
| Entry name: J2LPB5_9BURK | Protein name: Hemolysin-coregulated protein (Uncharacterized) | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTATGGATTGGACGAGAACTTGCCGGCGATCGGCATGTTCTTGGCCAAACTCCATCCCGCAGTCTTGACGCCCTTGGAAGACATGTCGTTGAGCTGCAATGTATGGGTCCAGATTACTTCGGTGAAGTTGAGCTTGAACTGCTCGGTCGGCATGTCGTTGGGATGGGTCTGCAGCTGGATTTCGCTGATGAGGGCATCCTTGAGCTCGATCTTGATGATGTTCATGGTCTTGCCGCCCGACTCGCGCGCAATGTAGATGGTGCTGGGCGCGCCGGCGCCGGTGCCGAGCAGCTTGGCGCCGAGGCAATATTCATACAGTTTCACCGAAGTCTGGTCGACGTATTTGACCAGGGTGAATTCGGTGATGATGGGGCGACCCGAAGTACGGGCGTTGTTACTGACATCGGTGGTGACTTGTTGCTTCATGCCCTGGTGCAGCGACACCAGTTCAATGCACAAGCCGGTCGGGCCATCGGCCACCCAGCCGCTGTTATCGACCTGGCTGCCGTCGCCGCTCAGGATGCTTTGATCGCCTGGCTGGAAAAGAATCAAATCCAT
Protein sequence:
MDLILFQPGDQSILSGDGSQVDNSGWVADGPTGLCIELVSLHQGMKQQVTTDVSNNARTSGRPIITEFTLVKYVDQTSVKLYEYCLGAKLLGTGAGAPSTIYIARESGGKTMNIIKIELKDALISEIQLQTHPNDMPTEQFKLNFTEVIWTHTLQLNDMSSKGVKTAGWSLAKNMPIAGKFSSNP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20077.9 | 185 | 5.57 | -0.176 | 36.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036624,IPR008514
Pfam: PF05638
SMART:
KEGG:
PRINTS: