Effector profile
PlantPEAD ID: PlantPEAD33312 Uniprot ID: A0A3M5D7I9 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 287 Pathogen type: Bacteria
Species: Pseudomonas aeruginosa Strain: ICMP 7846 Other name:
Gene name: NCBI Gene ID: RBSQ01001348
Entry name: A0A3M5D7I9_PSEAI Protein name: Type VI secretion system tube protein Hcp
DOI:
Gene/Protein information
Gene sequence:
ATGGATGCGATCATTCTCGATTTCGGCAGCGACATCAAAGGCGACAGCCTGCTCGTCGGCTACGAAAACAAGATCGAAATCATGTCCTACAGCCACAACGTGGCGATGCAGGTCACCAACGACGTCAGCAACTCGGAGCGCACCTCCGGCAAACCCCACGTCGGCGAATTCACCCTCACCAAGTTCATCGACACCTCGACCCCGACCCTCAACGAGTATTGCTGCGCCGGCAAGCCGATCGCCGAGGCGACCATCACCATCGGCCGCAACGCCGCCGAGGGCAACGGGCAGATCATGCCCTTCATCGTCTACACCCTGAACAACGTGGTGCTCTCCAACGTCAGCGTCAGCGGCGGCGCCGCCGGCAAGCCGGTGGAGACCCTGTCGCTGAACTTCACCAAGATCAAGTGGGAGCTGACCGCGCAGAAGGACGACGGCACCAAGGAAGGCACGGCCGCCTCAACCTGGGACCTGGCCGCCAACCAGCTGGTCAAGTGA
Protein sequence:
MDAIILDFGSDIKGDSLLVGYENKIEIMSYSHNVAMQVTNDVSNSERTSGKPHVGEFTLTKFIDTSTPTLNEYCCAGKPIAEATITIGRNAAEGNGQIMPFIVYTLNNVVLSNVSVSGGAAGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDLAANQLVK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17649.9 165 4.85 -0.128 10.74
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.