Effector profile
| PlantPEAD ID: PlantPEAD33349 | Uniprot ID: A0A3M6A2X1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 29438 | Pathogen type: Bacteria |
| Species: Pseudomonas savastanoi | Strain: pv. savastanoi | Other name: |
| Gene name: | NCBI Gene ID: RBUM01000328 | |
| Entry name: A0A3M6A2X1_PSESS | Protein name: Type III effector HopV1 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCCTTTATCGGGCACAACGTTTTCCCAGTGCATCAGTAGATCTTCGCGCAGCATGCCCAATGCCTGTCGTTGGGTCTTCAGGTCTGGTGAGAAAAATGCCGCATCAAATATGATGCCCATTCGCTCCTGGCTCTGCTCTGCTTGCAATTGCGCCTTTTTCGCCTGCTCGGGTTGCATGTCCGAGAAACTGAACACCGGGAGCATATTGCGTGACCAGCTCTCGGGCAAAGGCTGACCGCTGGCGAGCAAGGCACCGGCATAACACTCAGCCAATTGCTGCGAGCCGCGCATCATTCCGGCTCTGTACAACTCCTGCTCGGTGCGGCTTGACGCAAGCCGGGGATAGATCTGGGCAGCGGCTTTGGCGACTTCACTGATGGCGTCATCGTCGCCGCCGAAGAACGCTTTCAGCAGCGTATCTTCGCCGACAGCACCTTCAATACGTTTCGCCGCAGCGGGCCATGAGTCTCCTGTGGCCAGTTTGAAACCGTGATAAGGGTCTTTGGCCAGAGGGATAGGCAAGAGGCGTTTCGGCGTGGGTAGTTTTTCCGTCAGATGAGTGGTCAGGCCTTCGTTCAAGGCTTTCCAGTGCCGATGATCAATGTGACGACCCCTGAACTCCGGGTGGGTGTAACAGTGTATGAACTCGTGCCCTGCGACCTCGGCCGGGTGACTTTCAAGCGCAATGTTGGGGTTCAGCTTCACCTGACGGGTTTTAACGTTCCACTGACCTGCGACGCCAGGGGGAATGTCGTGAGTGACGTCTGCCTTTGCTTTGAAACAGTTACTGTCTTTGGGAATGTAGGCGCCGTAACGCTCCAGAACCGTTCTGTTTCCCTGATCCAGATCGTTCTGAGAAGAGCGATGCTTTAAACTCATGGCCGCCCATATACTGCCTCCAGGATCTTTTGCAAAATCATCCGGATGCCTTGTCAATCGACATCCTGTCGAGAGCGCAAGGGTTCCTACCATCAG
Protein sequence:
MMVGTLALSTGCRLTRHPDDFAKDPGGSIWAAMSLKHRSSQNDLDQGNRTVLERYGAYIPKDSNCFKAKADVTHDIPPGVAGQWNVKTRQVKLNPNIALESHPAEVAGHEFIHCYTHPEFRGRHIDHRHWKALNEGLTTHLTEKLPTPKRLLPIPLAKDPYHGFKLATGDSWPAAAKRIEGAVGEDTLLKAFFGGDDDAISEVAKAAAQIYPRLASSRTEQELYRAGMMRGSQQLAECYAGALLASGQPLPESWSRNMLPVFSFSDMQPEQAKKAQLQAEQSQERMGIIFDAAFFSPDLKTQRQALGMLREDLLMHWENVVPDKG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36108 | 325 | 6.9 | -0.5 | 41.29 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: