Effector profile
PlantPEAD ID: PlantPEAD33352 Uniprot ID: Q48J78 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. phaseolicola strain 1448A / Race 6 Other name: Pseudomonas savastanoi pv. phaseolicola
Gene name: HopV1 NCBI Gene ID: CP000058
Entry name: Q48J78_PSE14 Protein name: Type III effector HopV1
DOI:
Gene/Protein information
Gene sequence:
TTATTGCAGCATCAACATCCATTGAGGAGTGACACCATGAGCGACAGCATTCAACGTACCAGCGTCGGCGATTTTCCAATCTCGCAAACCGTGACCGTGCCTGCCTCGGCCAGCCTGGTGTTCATCAGCGGCACCCTGCCTGACCTCGCTGACCCACACGCCGCGGCGGGTACGCCTGCCGCATACGGGAATACTGAGGTCCAGACTGTTTCGGTGTTCAACAAACTGCGCAATATGCTCCGGCAACAGGACCTTGATCTGGGCGATATCGTGCAGTTGCGGGTGTTTCTGGTGGGGGCCGAGGAAACCGGCGGCAAGCTTGACTTTGCAGGCCTGCAGGCCGGTTACACGCAGTTTTTCGGCACCCCCGAGCAACCCTTGAAACCTGCGCGCACCGCTTTGCAGGTAGTGGCGCTGCCGTTGCCCGGTGCGCTGATCGAAGTGGAAGCGGTAGCGGCCAGGCGGGCTTGAGCACCTTTCCTTCCCGGTAGCCTTTAAAGCGAGGGCTTCGATGGGGCAGCCTTTATCGGGCACAACGTTTTCCCAGTGCATCAGTAGATCTTCGCGCAGCATGCCCAATGCCTGTCGTTGGGTCTTCAGGTCTGGTGAGAAAAATGCCGCGTCAAATATGATGCCCATTCGCTCCTGGCTCTGCTCTGCTTGCAATCGCGCCTTTTTCGCCTGCTCGGGTTGCATGTCCGAGAAACTGAACACCGGGAGCATATTGCGTGACCAGCTCTCGGGCAAAGGCTGGCCGCTGGCGAGCAAGGCACCGGCATAACACTCAGCCAATTGCTGCGAGCCGCGCATCATTCCGGCTCTGTACAACTCCTGCTCGGTGCGGCTTGACGCAAGCCGGGGATAGATCTGGGCAGCGGCTTTGGCGACTTCACTGATGGCGTCATCGTCGCCGCCGAAGAACGCTTTCAGCAGCGTATCTTCGCCGACAGCACCTTCAATACGTTTCGCCGCAGCGGGCCATGAGTCTCCTGTGGCCAGTTTGAAACCGTGATAGGGGTCTTTGGCCAGAGGGATAGGCAAGAGGCGTTTCGGCGTGGGTAGTTTTTCCGTCAGATGAGTGGTCAGGCCTTCGTTCAAGGCTTTCCAGTGCCGATGATCAATGTGACGACCCCTGAACTCCGGGTGGGTGTAACAGTGTATGAACTCGTGCCCTGCGACCTCGGCCGGGTGACTTTCAAGCGCAATGTTGGGGTTCAGCTTCACCTGACGGGTTTTAACGTTCCACTGACCTGCGACGCCAGGGGGAATGTCGTGAGTGACGTCTGCCTTTGCTTTGAAACAGTTACTGTCTTTGGGAATGTAGGCGCCGTAACGCTCCAGAACCGTTCTGTTTCCCTGATCCAGATCGTTCTGAGAAGAGCGATGCTTTAAACTCATGGCCGCCCATATACTGCCTCCAGGATCTTTTGCAAAATCATCCGGATGCCTTGTCAATCGACATCCTGTCGAGAGCGCAAGGGTTCCTACCATCAGTTTCACAGAAAACCTGACTGGATCAATCCCCGGCTCTCGCTGGGCGCGTGCAGCTCCATTGTTGTCTGCAGCCGCGCTGCCTGAGTTTTCCTGAGCCGCCTGCGGTTCTCCACCTGACGATGTGCCGGACGCTCGTAGGCGTAACGACGATGGCGCGTCCATCGGTGGCAGTGGTCGCTGACCTTGCGCTGCATCCAGTCGCAT
Protein sequence:
MRLDAAQGQRPLPPMDAPSSLRLRASGTSSGGEPQAAQENSGSAAADNNGAARAQREPGIDPVRFSVKLMVGTLALSTGCRLTRHPDDFAKDPGGSIWAAMSLKHRSSQNDLDQGNRTVLERYGAYIPKDSNCFKAKADVTHDIPPGVAGQWNVKTRQVKLNPNIALESHPAEVAGHEFIHCYTHPEFRGRHIDHRHWKALNEGLTTHLTEKLPTPKRLLPIPLAKDPYHGFKLATGDSWPAAAKRIEGAVGEDTLLKAFFGGDDDAISEVAKAAAQIYPRLASSRTEQELYRAGMMRGSQQLAECYAGALLASGQPLPESWSRNMLPVFSFSDMQPEQAKKARLQAEQSQERMGIIFDAAFFSPDLKTQRQALGMLREDLLMHWENVVPDKGCPIEALALKATGKERCSSPPGRYRFHFDQRTGQRQRHYLQSGARRFQGLLGGAEKLRVTGLQACKVKLAAGFLGPHQKHPQLHDIAQIKVLLPEHIAQFVEHRNSLDLSIPVCGRRTRRGVWVSEVRQGAADEHQAGRGRHGHGLRDWKIADAGTLNAVAHGVTPQWMLMLQ
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
62236.7 565 9.39 -0.535 41.85
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.