Effector profile
| PlantPEAD ID: PlantPEAD33400 | Uniprot ID: B2CSN1 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 123356 | Pathogen type: Oomycota |
| Species: Hyaloperonospora parasitica | Strain: NOKS1 | Other name: Peronospora parasitica |
| Gene name: Atr13 | NCBI Gene ID: EU549828 | |
| Entry name: B2CSN1_9STRA | Protein name: Avirulence protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGCCTTGTTCACGCGGTACTGCTACCTGGCATTATTGTCATGGTATCCAACGGGAATCTGCTCCACGCCCATGCGCTCTATGAGGACGAGACGGGTGTCACTGCTGGTCGCCAGCTCCGAGCAGCCGCCAGCGAAGTATTTGGACTCTCACGAGCTAGTTTCGGGCTTGGTAAGGCTCAAGATCCGCTCGACAAGTTCTTTAGGAAGATAATAAACTCGCGGAAGCCCATCGAAACCAGTTATTCGGCTAAAGGCATCCACGAGAAGATTATAAAGGCATACGATCGTCATGTCTTCGAATCTAAGAAGGCACACGATCGTCATGTCTCCAAATCTAAGAAGGCACACGGTCGTCATGTCTCCAAATCTAAGATGGCACACGATCGTCATGTCTCCAAATCTGAGAAGGCCCCCATCCAGTATGCCAGTGTAGCGGATTACCTGAAAAAAATCTACCCCGGTACGGACATTGAACGTATTGTCTCGACGCTCAAGCGTCACGACGAAGTAGGAGCTAAAGATTTGGGAGCGAAACTTCAGACTGCCCCTGCCAGTCAGTAG
Protein sequence:
MRLVHAVLLPGIIVMVSNGNLLHAHALYEDETGVTAGRQLRAAASEVFGLSRASFGLGKAQDPLDKFFRKIINSRKPIETSYSAKGIHEKIIKAYDRHVFESKKAHDRHVSKSKKAHGRHVSKSKMAHDRHVSKSEKAPIQYASVADYLKKIYPGTDIERIVSTLKRHDEVGAKDLGAKLQTAPASQ
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20711.8 | 187 | 9.96 | -0.479 | 27.97 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031791,IPR038525
Pfam: PF16829
SMART:
KEGG:
PRINTS: