Effector profile
| PlantPEAD ID: PlantPEAD33411 | Uniprot ID: Q4VKJ2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 123356 | Pathogen type: Oomycota |
| Species: Hyaloperonospora parasitica | Strain: | Other name: Peronospora parasitica |
| Gene name: ATR1NdWsB | NCBI Gene ID: AY842882 | |
| Entry name: Q4VKJ2_9STRA | Protein name: Avirulence protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGCGTCTGCTACTTCGTTCTCCTGCCTTCTGTTGCTCTGGCCGTCATAGCCACCGAGTCGTCGGAAACGTCCCGCACGATCGTCCACGTGTTCCCCCTCCGTGACGTCGCCGACCATCGCAACGACGCTCTAATCAATCGGGCGTTGAGAGCGCAGGCAGCTCTCGATGACGATGAAGAGAGATGGCCGTTCGGGCCTTCGGCCGTCAAAGCGTTGATTAGAACCATCGACAGCCATAGAGCCGGCTTGAATGATGAGGCTAAGATGAAGGAGGTCGTACAAACCTGGAACAAACTAATCGAACGGGATAATTTGATTGGCGAGATAGGAAAACATTATAGTGAAGCGCCGGGGCCACTCTATGATACCTATGATGAAGCTCTCGCCACTAGGCTAGTAACAACCTATTCGGATCGCGGAGTAGCTCGGGCAATTCTACATACAAGGCCTTCGGACCCACTTTCGAAAAAGGCAGGGCAAGCGCACCGATTGGAGGAAGCAGTGGCATCACTATGGAAAGGGCGAGGATACACCTCAGACAATGTCGTTTCAAGCATTGCTACCGGCGACGATGTTGACTTTTTCGCACCCACGGCCTTCACTTTCCTAGTAAAGTGTGTCGAATCTAAGGTCGAAGCGAACTACGCCATATTCAAGTATTTTGGTAGTAATCCCAGCAGATACTTTTCCGCTGTGCTGCACGCGATGGAGAAGCCTGGTGCTGATATTCGAGAGCTTGACAACAGCAAAAATTGGATGTTTCGATTTTATGCGCATGCGCAGGAGCCGCTCTCTTCAACAGAATTTGAATCCATGCTGCCTCGTGTCCAGTCTGAAGAATATGCGATTCATGGTGCACAGAACGACTACGAGAAGCTCAGCTCCTCTCAAATCAAGGAACTCGTGAAAGAGTATTCGAGAATATATTCTGTTTAA
Protein sequence:
MRVCYFVLLPSVALAVIATESSETSRTIVHVFPLRDVADHRNDALINRALRAQAALDDDEERWPFGPSAVKALIRTIDSHRAGLNDEAKMKEVVQTWNKLIERDNLIGEIGKHYSEAPGPLYDTYDEALATRLVTTYSDRGVARAILHTRPSDPLSKKAGQAHRLEEAVASLWKGRGYTSDNVVSSIATGDDVDFFAPTAFTFLVKCVESKVEANYAIFKYFGSNPSRYFSAVLHAMEKPGADIRELDNSKNWMFRFYAHAQEPLSSTEFESMLPRVQSEEYAIHGAQNDYEKLSSSQIKELVKEYSRIYSV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 35122.5 | 312 | 5.77 | -0.36 | 39.97 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR048935
Pfam: PF21421
SMART:
KEGG:
PRINTS: