Effector profile
| PlantPEAD ID: PlantPEAD33460 | Uniprot ID: A0A0Q0GCU6 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. viburni strain ICMP3963 | Other name: |
| Gene name: | NCBI Gene ID: LJRR01000372 | |
| Entry name: A0A0Q0GCU6_9PSED | Protein name: Restriction endonuclease NgoMIV | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGACAAATCCAAACGTTTTTTTTACCTCGCCCGACAGATTCAATAATGCTTCGACAACTCGGCGCATTTCTACATTATCAAGATTTAGCAAGGGGATTCTCGTATGCACGACTCCGTCTTTTTTTTCATTTAGGCCGAGAGTGAAAAATGGCGTTCTTAAGTTAAATTCGTTAAGCCTCAGGAGGCTTTGGCAAGCGTTGCTGTCTAGGTTGTCGATAACGCCAATATCAGATAAGAAATACACCCACTTGAATTTATCCTGATAAATCTTTATAGAAACTTCTTTGAATTCAAAGCAATAAACTTCATGCTCATGTTTTTTCTCAGGAAAACCAGGCATCCCATAGTCTTTTGCGAGCCCATCGATTAAGCGGTCGAACGAATTCTTCAT
Protein sequence:
MKNSFDRLIDGLAKDYGMPGFPEKKHEHEVYCFEFKEVSIKIYQDKFKWVYFLSDIGVIDNLDSNACQSLLRLNEFNLRTPFFTLGLNEKKDGVVHTRIPLLNLDNVEMRRVVEALLNLSGEVKKTFGFV
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15137.5 | 130 | 6.3 | -0.237 | 25.93 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR010261
Pfam: PF05932
SMART:
KEGG:
PRINTS: